Shewanella frigidimarina: Sfri_2688
Help
Entry
Sfri_2688 CDS
T00395
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sfr
Shewanella frigidimarina
Pathway
sfr01501
beta-Lactam resistance
sfr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sfri_2688
01503 Cationic antimicrobial peptide (CAMP) resistance
Sfri_2688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfr03036
]
Sfri_2688
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_2688
01504 Antimicrobial resistance genes [BR:
sfr01504
]
Sfri_2688
Chromosome and associated proteins [BR:
sfr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Sfri_2688
Transporters [BR:
sfr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Sfri_2688
Antimicrobial resistance genes [BR:
sfr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Sfri_2688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
GapR_DNA-bd
Jag_N
NQRA_N
Motif
Other DBs
NCBI-ProteinID:
ABI72528
UniProt:
Q07ZN6
LinkDB
All DBs
Position
3230929..3231990
Genome browser
AA seq
353 aa
AA seq
DB search
MSRLSNNLFFGTILATTVLATIVSYTAQASDVATLKLVYSEQYQPRIYDAKIEAIKAATI
SAQTSGRIINIHFDVNDLVPQGAALLEITNKEQGAGYAGAEADLAKAEALNSEAQAQYLR
YKTLFPKGAISKGAMDEATAKAKSSKQAVSAAQAQLIKAKESLNYTVVSAPFSGRMTQRF
IEQGETISYGQALFSGYDTQHLRAVFQIPQQDVAQVQKQEQVSVQLFNGDKIISNDINVY
QFADPLTHQHQVRVNIDASNIEDVIVGQWIKVIVNFPSRTSLMIPLSAIHQVSDLTSVYR
QMADKIVLNQVRIGRVDHQNNTAEVLSGLMEGDEIVIDAGRYLIQSSATKGQE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcttatctaataatttattcttcggcaccattctcgcaacaacagtactagcc
acaatagtatcttatacagcgcaagcctctgatgttgcaacattaaaactagtatattcg
gaacaatatcagccgcgtatttatgatgcaaaaattgaagctattaaagcggcaacaatt
tctgcacaaacctcagggcggatcattaatattcattttgatgtaaatgacctcgtccca
cagggcgctgcattattggagattaccaataaagagcaaggtgcaggatacgcgggggca
gaagctgatctagctaaagctgaggcgctaaacagtgaagcacaagcacaatatcttcgt
tataaaacattatttcccaagggcgccatatcaaaaggtgcgatggatgaagccactgcc
aaagcaaaatccagcaaacaagcagtcagtgccgctcaagcacagttaataaaggctaaa
gaaagtttaaattacactgtagtaagcgcaccttttagtggccgaatgacccaacgattt
atcgaacaaggtgaaaccatatcttacggccaagcgttgttctctggctacgacactcaa
caccttagagctgtatttcaaattcctcagcaagatgtggctcaggtgcaaaaacaagaa
caagtaagcgttcaattgttcaatggcgataaaatcatttctaatgatattaacgtctat
caatttgccgatccgttaactcatcaacatcaagttagagtaaacattgatgctagtaac
attgaagacgtcatagtaggtcaatggataaaagtcatcgttaacttccctagtcgaacg
agtttaatgatcccattatcggccatacatcaagtcagtgacttaacgtcggtatatcgt
caaatggcagacaaaatagtgcttaaccaagtacgtatcggccgagtagaccatcagaat
aataccgcagaggtcttatctggtttaatggaaggcgatgaaattgttatcgacgctgga
cgttatttaatacagtcctcagcaacaaaaggtcaggagtaa
DBGET
integrated database retrieval system
