Shewanella frigidimarina: Sfri_3777
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Entry
Sfri_3777 CDS
T00395
Name
(GenBank) 2-oxo-acid dehydrogenase E1 subunit, homodimeric type
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00010
Glycolysis / Gluconeogenesis
sfr00020
Citrate cycle (TCA cycle)
sfr00620
Pyruvate metabolism
sfr00785
Lipoic acid metabolism
sfr01100
Metabolic pathways
sfr01110
Biosynthesis of secondary metabolites
sfr01120
Microbial metabolism in diverse environments
sfr01200
Carbon metabolism
sfr01210
2-Oxocarboxylic acid metabolism
Module
sfr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Sfri_3777
00020 Citrate cycle (TCA cycle)
Sfri_3777
00620 Pyruvate metabolism
Sfri_3777
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Sfri_3777
Enzymes [BR:
sfr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
Sfri_3777
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
TMP_3
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
ABI73604
UniProt:
Q07WL0
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Position
complement(4495826..4498492)
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AA seq
888 aa
AA seq
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MSEDMLQDLDPSETQEWVDALQAVLEQEGPERAHFLLEKLIDKARRNGTHLPYNATTAYL
NTIPAGQEPNMPGNQEMERRIRAIIRWNALAMVLRGSKKDLELGGHISSFASSATIYDVC
FNHFFRAPNEHDGGDLVYFQGHIAPGIYARSFLEGRITEDQMANFRQEVDGKGLSSYPHP
KLMPTYWQFPTVSMGLGPIQAIYQARYLKYLTDRGLKDCSKQTVYCFLGDGECDEPEALG
AIGLAAREELDNLVFIVNCNLQRLDGPVRGNGKIIQELEGEFRGAGWEVVKVIWGRYWDP
LLARDTSGKLLQLMEETVDGEYQNCKAKGGAYTREHFFGKYPETAEMVANMSDDDIWRLN
RGGHDPVKVYAALEHAQKTKGRPTVILAKTVKGYGLGDAGEGKNIAHNVKKMGAESIRYF
RDRFNIPIPDDQLEDLPFYHPGPDSEEVKYLKSRREALLGYLPQRREKFTEELEIPSLKI
FDSILKGSNGREISSTMAFVRVLTALLKDKGIGKRIVPIIPDEARTFGMEGLFRQVGIYA
HEGQKYIPQDSDQVAYYREDKTGQVLQEGINELGAMSSWVSAATSYSVNNMPTIPFYIYY
SMFGFQRIGDMAWAAGDMRARGFLVGGTSGRTTLNGEGLQHQDGHSHVLANTIPNCISYD
PTYGYEIAVVVQDGIRRMYGENQEDIFYYLTTMNENYVQPEMPAGAEEGIVKGIYKLETV
AGSGKGKVQLMGCGTILEEVRKAAQALAKDFGVSADVFSVTSFNELTRDGQAAERWNMLH
PTAEPKQAYISQVLSADAPAIVATDYMKIYGEQLRAFVPTDYKVLGTDGFGRSDSRANLR
HHFEVDAKFIVIAALKSLVERNEMPVDVLTKAIAEYGIDADKINPQFA
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagatatgcttcaagatttagacccatcagaaacccaagagtgggttgatgct
ctacaagctgtgttagagcaagaagggcctgaacgtgcacactttttactcgaaaaatta
atcgacaaagctcgccgtaacggtactcacttaccgtataacgcgactactgcgtattta
aacacgattccagcaggccaagagccaaacatgcctggcaaccaagaaatggaacgccgt
attcgggcgattattcgctggaatgcattggcgatggtgttacgcggttctaagaaagat
ttagagcttggtggccatatctcaagtttcgcgtctagtgcgacaatttacgatgtgtgt
tttaaccatttcttccgtgcgcctaacgagcatgacggtggtgatttggtgtatttccaa
ggccatatcgcacccggtatttatgcgcgttcgttccttgaaggccgtattactgaagac
caaatggccaacttccgtcaagaagttgatggcaaaggtctttcttcgtacccacaccct
aagttaatgcctacttactggcagttcccgacggtatcgatgggtctaggtcctattcaa
gcgatttaccaagcgcgttatttgaagtatttaactgaccgtggtttaaaagattgctct
aagcagactgtttactgtttcttaggtgacggtgagtgtgatgagccagaagcattaggt
gctattggtttagctgcacgtgaagaattagataacttagtatttatcgttaactgtaac
ttacagcgtcttgatggtcctgttcgtggtaacggtaaaattatccaagaacttgaaggc
gaattccgcggcgcaggctgggaagtggttaaagtgatttggggacgctattgggatccg
ttattggctcgtgatactagcggtaaattattgcagttaatggaagaaaccgtagacggt
gaataccaaaactgtaaagccaaaggcggcgcgtacacgcgtgagcatttctttggtaag
tacccagaaactgccgaaatggttgctaacatgtcagatgatgacatttggcgtttaaac
cgtggtggtcatgatcctgttaaagtttacgctgcacttgaacatgcacaaaaaaccaaa
ggtcgcccaaccgttattttagctaaaacagttaaaggttacggtttaggtgatgcaggc
gaaggtaaaaacatcgctcacaacgtgaagaagatgggcgctgagtctattcgttacttc
cgcgatcgtttcaatatcccgatccctgatgaccagctagaagatttgcctttctatcat
ccaggtccagactctgaagaagtgaaatacttaaagagtcgccgtgaagcattattaggt
tatttaccgcaacgccgtgaaaaattcactgaagagttagaaattccttcattgaaaatt
tttgattcgattttaaaaggctctaatggccgtgaaatctcgtcaacgatggcgtttgtc
cgagtattaactgcgttattgaaagacaaaggtattggcaagcgtattgtgccgattatt
cctgatgaagcacgtacttttggtatggaaggtttattccgtcaagtgggtatttatgct
cacgaaggccaaaaatatattccacaagattctgatcaagtggcgtactaccgtgaagat
aaaaccggtcaggttttacaagaaggtattaacgaattaggcgcaatgtcatcttgggta
tcagctgcaaccagctactcagtcaataacatgccaacaattccgttttacatctactac
tctatgttcggtttccaacgtattggtgacatggcatgggctgctggcgacatgcgcgca
cgtggtttcttagtaggtggaacttcaggtcgtacaacattgaacggcgaaggtttacag
catcaagatggtcatagccacgtattagctaatactattccaaactgtatctcttacgat
ccaacttacggttatgaaattgcggttgtagtgcaagatggtattcgtcgtatgtatggc
gaaaatcaagaagatatcttctactacctaaccacaatgaacgaaaactatgttcagcca
gaaatgccagccggtgccgaagaaggtattgtcaaaggtatttacaagcttgaaacagtt
gccggtagtggtaaaggtaaagtgcagttaatgggttgcggtacgatacttgaagaagtg
cgtaaagcagcacaagcattagcaaaagactttggcgtaagcgctgacgtattcagtgtg
actagctttaacgagttaactcgtgacggccaagctgctgaacgttggaacatgttgcat
ccaacagctgaacctaagcaagcgtatattagccaagtattatctgcagacgcgccagcg
attgtggcgactgactatatgaagatatacggcgagcaattacgtgctttcgtaccgaca
gactataaagtacttggtactgatggttttggtcgtagcgatagccgcgcaaacttacgt
catcactttgaagtagatgctaagtttattgttattgcggcactgaagtctcttgttgag
cgtaatgaaatgcctgttgatgtgttgactaaagccatcgctgaatatggtattgatgct
gacaagattaacccacagttcgcgtaa
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