Shewanella frigidimarina: Sfri_3817
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Entry
Sfri_3817 CDS
T00395
Name
(GenBank) 3-isopropylmalate dehydratase, small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00290
Valine, leucine and isoleucine biosynthesis
sfr00660
C5-Branched dibasic acid metabolism
sfr01100
Metabolic pathways
sfr01110
Biosynthesis of secondary metabolites
sfr01210
2-Oxocarboxylic acid metabolism
sfr01230
Biosynthesis of amino acids
Module
sfr_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
Sfri_3817
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
Sfri_3817
Enzymes [BR:
sfr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
Sfri_3817
4.2.1.35 (R)-2-methylmalate dehydratase
Sfri_3817
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
TilS
Orthopox_F14
Motif
Other DBs
NCBI-ProteinID:
ABI73642
UniProt:
Q07WH2
LinkDB
All DBs
Position
complement(4552406..4553011)
Genome browser
AA seq
201 aa
AA seq
DB search
MQAFTAHTGLAVAIDSANVDTDQIIPKQFLSKVTRDGFGVHLFHDWRYLDDAGDKPNPDF
ELNQPRYKGASILLAQENFGCGSSREHAPWALADFGFRVIIAPTFADIFYGNSINNGLLP
VKLTSVQVQQLMDEVAAKEGAQITVDLQALTVTSPSGSVFDFTIVESARHKLLNGLDAIG
LTLSFEQQISDYETHIPAWFA
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatttactgcccataccggtttagcggtcgctattgatagcgctaatgtcgat
accgatcagattattcctaagcaatttttgtctaaagtcacccgtgacggttttggggta
catttattccatgactggcgttacttagatgatgcaggcgataaacctaatcctgatttt
gaacttaatcagccacgttataaaggcgcatctattttactagcccaagaaaactttggt
tgtggatcgtcgcgtgagcatgcgccatgggcactagctgattttggctttagagtgatc
atcgcgccgacctttgccgatattttttacggtaattcgattaataacggtttgttaccc
gttaaattaacatcggtacaagtgcaacaattaatggatgaagtggcagcaaaagagggg
gcgcaaattacagtcgatttacaagctctcactgttacgtcaccttcaggaagcgtgttt
gatttcacaatagtggagtctgctcgacataagttattgaatggtcttgatgctattggt
ttgacgttgtcatttgaacagcaaatcagcgattatgaaacacacataccagcttggttc
gcataa
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