Shewanella frigidimarina: Sfri_3863
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Entry
Sfri_3863 CDS
T00395
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sfr
Shewanella frigidimarina
Pathway
sfr01501
beta-Lactam resistance
sfr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sfri_3863
01503 Cationic antimicrobial peptide (CAMP) resistance
Sfri_3863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfr03036
]
Sfri_3863
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_3863
01504 Antimicrobial resistance genes [BR:
sfr01504
]
Sfri_3863
Chromosome and associated proteins [BR:
sfr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Sfri_3863
Transporters [BR:
sfr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Sfri_3863
Antimicrobial resistance genes [BR:
sfr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Sfri_3863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
ABI73688
UniProt:
Q07WC6
LinkDB
All DBs
Position
complement(4615355..4616503)
Genome browser
AA seq
382 aa
AA seq
DB search
MHKALKVAAVISAALWITACGQGDENAQSQQPRPPTPVGVMTVEAISQAIKVELPGRSRA
FLEAEVRPQVSGIITKRAFTEGTEVKQGQSLYQIDAATYKAALVSAEADLASANAGLASA
KAKAARYAKLVKTNAVSKQDFDETEALFKEAQASVTVAKAAINTATINTEYTEVKAPISG
RIGKSSVTAGALVTANQSNTLATIQQLDPINIDIVQSSAQLLRLKANLRSGQLLKSDNAK
VTLLLEDGSTYDQQGTLQFAEVNVDETTGSVTLRAEFPNPDGILLPGMYVRALLNAGQDP
QAILVPQRAITRNSKGQAVAMIVNQDSNVEMRVVQTAEVIGHQWRIVDGLSVGDKLIVEG
LQKIRPGAPVSAQVLTADQPQK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaagcattgaaagtcgccgcagttatttctgctgcattatggattaccgcttgt
ggtcaaggggatgaaaatgcccagtcacagcaaccgcgaccacctacacccgttggcgtg
atgacagttgaagcaatttcgcaagcgattaaggttgaattacctggtcgcagtcgtgcc
tttttagaagccgaagtgcgtccacaagtgtcaggtattatcactaagcgtgcctttacc
gaaggcaccgaagttaaacaaggtcaatctctatatcaaattgatgcagccacttataaa
gcggcattagtgagtgcagaagccgatcttgctagcgcaaatgctggtttagcctcagca
aaagccaaggcggcgcgttatgccaaattagtcaaaaccaatgcagttagtaagcaagat
tttgacgagacggaagcgttatttaaagaagcgcaagcttcagtaacggtagcaaaagcc
gccattaatactgcgaccatcaacaccgaatatactgaagttaaagcaccgatttctggt
cgtattggtaagtcatctgttactgctggcgcgttagttaccgctaatcaaagtaatacc
ttagcgacaattcaacagctcgatccaattaatatcgacatcgttcagtcaagtgcacaa
ttattgcgtttaaaagccaatttacgttcaggccagttactgaaaagtgacaatgctaaa
gtgaccttattgcttgaagacggcagcacatatgatcagcaaggtacattacaatttgct
gaagttaatgtagatgaaactactggttccgtgacgttacgtgccgagttccctaatcct
gacggtatattattacctggtatgtatgtgcgtgcgctattaaatgctggccaagaccca
caggctattttagtgcctcaacgtgctattacccgtaatagcaaaggccaagcggttgca
atgatagtaaaccaagacagtaatgttgaaatgcgcgtggtacaaaccgctgaagtgatt
ggtcatcaatggcgcattgtcgatggtttgtctgttggcgataaattaattgtcgaagga
ttacaaaaaatccgccctggtgcaccagtatctgcacaggtgttaacggctgatcaacca
caaaagtag
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