Shewanella frigidimarina: Sfri_3986
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Entry
Sfri_3986 CDS
T00395
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family protein
KO
K18299
multidrug efflux pump
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_3986
01504 Antimicrobial resistance genes [BR:
sfr01504
]
Sfri_3986
Transporters [BR:
sfr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Sfri_3986
Antimicrobial resistance genes [BR:
sfr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
Sfri_3986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ABI73811
UniProt:
Q07W03
LinkDB
All DBs
Position
4749815..4752976
Genome browser
AA seq
1053 aa
AA seq
DB search
MLSQFFIKRPIFAAVLSLLFFISGAIAVWQLPITEYPEVVPPTVVVTANYPGANPKIIAE
TVASPLEQEINGVENMLYMSSQATSDGRMTLTITFAIGTDVDLAQTQVQSRVERAKPRLP
EEVQRLGIVTEKSSPSLTMVVHLTSPDDRYDMLYLSNYAVLKVKDELARITGVGAVRVFG
AGDYSMRVWLDPNKVAAIGLSPSNIVAAIREQNQQAAAGSLGAQPSGDSDFQLLINVKGR
LSNVEEFEDIIVKVGDQGQITRLKDVARVELGASTYALRSMLDNKDAAALPVFQASGSNA
IQISDDVRSKMAELSKSFPEGLTYDIVYDPTVFVRGSIKAVVQTLVEALLLVVLVVVLFL
QTWRASIIPLVAVPVSLVGTFAFMHLMGFSLNALSLFGLVLAIGIVVDDAIVVVENVERN
ISDGLSPVAATQKAMKEVTGPIIATTLVLAAVFIPTAFMSGLTGQFYKQFALTITISTFI
SAINSLTLSPALSALLLKGHHEKKDMLTRGMDKLLGGWLFNPFNRMFARMSNGYGWLVKK
IIRFGAVIGILYIGLVGLTGLQFANTPTGYVPGQDKQYLIAFAQLPDAASLDRTEAIVKE
MSRIALDQPGVAHAVAFPGLSINGFTNSTNSAILFTPLDDFADRKDPSLSAGAIAAALNQ
KFASINGAFIAIFPPPPVQGLGTIGGFRLQIQDRANYGYEELYKVTMQVMQKAWATPELA
GVFSSYQVNVPQLEVNIDRTKAKQQSVSLDELFSTLQGYMGSVYANDFNQFGRTYQVNVQ
ADEQFRQTPEQIAQLKVRNNQGEMVPIGSFINVTNSSGPDRVMHYNGFTTAELNGGAAPG
FSSGEAQAAIEKILAETLPNGMTYEWTEITYQQILAGNAGAYIYPLIILLVFMVLAAQYE
SLSLPIAIILIIPMTLLSALTGVLIYGGDNNIFTQIGLIVLVGLATKNAILIVEFAKELQ
DDGMEPLEAILEAGRLRLRPILMTSIAFIMGVVPMVFSSGPGSEMRQAMGVAVFSGMIGV
TIFGLILTPLFYYALAKRGKNKTELAESAITHD
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctcaattctttattaaaagacctatttttgccgcggtgctgtcgctactgttc
tttatttcaggcgcgatcgcagtatggcaattaccgattaccgagtatccagaggtcgtg
ccgccaacggtagtggtgacggcaaactacccaggtgctaaccctaaaatcattgctgaa
accgttgcatcaccgctagagcaagagattaacggcgtagaaaacatgttgtacatgtct
tcgcaagccacttcagatggccgtatgacgctaaccatcacctttgcgattggtactgat
gttgatttagctcaaacccaagtccaaagccgggtagaacgagcaaaacctcgtttacca
gaagaagtacaacgcttaggtattgtcactgaaaaatcatcacctagcttaaccatggtg
gtgcatttaacctcgcccgacgaccgttacgacatgttatacctgtctaactatgcggta
ttgaaagtaaaagatgaattagctcgtattactggtgtgggtgctgtgcgtgtgtttggc
gctggcgactacagcatgcgagtgtggctagaccctaataaagtagcagcaatcggatta
tcaccgagtaatattgttgccgctattcgtgaacaaaaccaacaagccgcagccgggagt
ttaggcgcgcaacctagtggtgacagtgatttccaattactgattaacgttaaaggccgt
ttatccaacgttgaagagttcgaagacattattgttaaagtgggtgatcaaggtcagatc
actcgtttaaaagatgttgcccgggttgaattaggtgcatcgacttacgccctacgctca
atgttagacaataaagacgcggctgcattacctgtgttccaggcctcgggctctaacgcg
attcaaatatctgatgatgtccgttctaaaatggctgagttgtctaagtcatttccagaa
ggcttaacctacgacatcgtctacgatccaaccgtgttcgtgcgtggctcaattaaagct
gtggtacaaacactggttgaagcattattgctggttgtattagtggtagtgctgttttta
caaacgtggcgcgcatccattattccattagtggcggttccagtatcacttgtgggtaca
ttcgcctttatgcacctaatgggcttttcgctgaatgccttatcactgtttggcttagtg
ctcgcgattggtatcgtggtcgatgatgcgattgttgtggttgaaaacgttgagcgaaat
atctcagacggattatcgcccgttgctgccactcaaaaggcaatgaaagaagtgaccggt
ccgattattgccactacattggtactggcggcggtatttattccaacggcatttatgtca
ggcttaactgggcaattttataagcagttcgcgttaaccattaccatctccacctttatt
tcggcgattaactcgttaacccttagccctgcattatcggcattattgcttaaaggtcat
cacgagaaaaaagatatgctgacccgtggtatggataagctgctcggaggctggttattt
aatccgtttaaccgcatgtttgcgcgtatgtctaacggttacggctggttagtgaagaaa
atcattcgttttggtgctgtcattggtattttgtatatcggtttagtcggcttaacaggc
ttacagtttgccaataccccaacaggttatgtgcctgggcaagataaacaatatcttatt
gcctttgcccaactacctgatgctgcatcattagatcgcactgaagctatcgtgaaagaa
atgtcacgtattgcactagatcaaccgggtgtagcccatgctgtagccttccctggttta
agcattaatggctttaccaatagtactaacagcgccattttgtttaccccgctggatgac
tttgccgatcgcaaagatccatcattatcagcaggtgctattgctgccgcgttaaatcaa
aaatttgcctctattaacggcgcatttattgcgattttcccgccaccgccagtgcaaggc
ttaggcaccattggtggctttagattacaaattcaagatcgtgctaattacggttacgaa
gagttgtataaagtgaccatgcaagtgatgcaaaaagcatgggcaacgccagagctagcg
ggagtattctcgagttatcaagtcaatgtgccacaacttgaagtgaacatcgatcgcacc
aaagccaaacagcaatcggtgtcgttagacgaattgttctccaccctgcagggatacatg
ggttcggtttacgccaacgacttcaaccagtttggccgtacttatcaagtgaacgtacag
gcagatgaacagtttagacaaacgcctgaacaaatcgcccaactaaaagtacgtaacaac
caaggtgaaatggtgcctattggatcatttattaatgtcaccaattcatctggtccagac
cgagtcatgcattacaacggttttaccactgcggaattaaatggtggtgctgcacccgga
tttagtagcggtgaggcgcaagctgcaattgaaaagattctagctgaaaccctacctaat
ggtatgacatacgagtggacagagatcacctaccaacaaattttggcaggtaatgcaggc
gcctatatttacccattaattatcttgttagtgtttatggttttagccgcgcaatatgaa
agcttaagcttaccaatagccattattctgattatcccaatgacgctgttatcggcatta
acaggggtacttatttacggtggagataacaatatctttacccagattgggttaattgta
ctggtggggctggcaaccaaaaatgccattctaattgttgagtttgccaaagagttacaa
gatgatggcatggaaccattggaggccatacttgaagccggtcgcttacgtttacggcct
attttaatgacctcgatagccttcattatgggtgtggtacctatggttttttctagcgga
cctggttcagaaatgcgtcaagcaatgggtgttgcagtattctctggcatgattggggtg
actatttttggccttatattaacgccactgttttattatgccctagcaaaacgtgggaaa
aataaaaccgagctcgccgaatcggccataacacacgattaa
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