Shigella flexneri Shi06HN006 (serotype Yv): SFyv_0121
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Entry
SFyv_0121 CDS
T03315
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00540
Lipopolysaccharide biosynthesis
sfs01100
Metabolic pathways
Module
sfs_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SFyv_0121
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sfs01005
]
SFyv_0121
Enzymes [BR:
sfs01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
SFyv_0121
Lipopolysaccharide biosynthesis proteins [BR:
sfs01005
]
Lipid A
SFyv_0121
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
DUF6225
Motif
Other DBs
NCBI-ProteinID:
AIL38930
LinkDB
All DBs
Position
104647..105564
Genome browser
AA seq
305 aa
AA seq
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MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIPIMDGSAAPFVYLLLDAGI
DELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTIDFNHPAIDSSNQRYAMNFSAD
AFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEYVTFQDDAELPLAFKAP
SAVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggacacttaaacgtatcgttcaggcgacgggtgtcggtttacatacc
ggcaagaaagtcaccctgacgttacgccctgcgccggccaacaccggggtcatctatcgt
cgcaccgacttgaatccaccggtagatttcccggccgatgccaaatctgtgcgtgatacc
atgctctgtacgtgtctggtcaacgagcatgatgtacggatttcaaccgtagagcacctc
aatgctgctctcgcgggcctgggcatcgataacattgttatcgaagttaacgcgccggaa
atcccgatcatggacggcagcgccgctccgtttgtatacctgctgcttgacgccggtatc
gacgagttgaactgcgccaaaaaatttgttcgcatcaaagagactgttcgtgtcgaagat
ggcgataagtgggctgaatttaagccgtacaatggtttttcgctggatttcaccatcgat
tttaaccatccggctattgattccagcaaccagcgctatgcgatgaacttctccgctgat
gcgtttatgcgccagatcagccgtgcgcgtacgttcggtttcatgcgtgatatcgaatat
ctgcagtcccgtggtttgtgcctgggcggcagcttcgattgtgccatcgttgttgacgat
tatcgcgtactgaacgaagacggcctgcgttttgaagacgaatttgtgcgtcacaaaatg
ctcgatgcgatcggtgacttgttcatgtgtggtcacaatattattggtgcatttaccgct
tataaatccggtcatgcactgaataacaaactgctgcaggctgtcctggcgaaacaggaa
gcctgggaatatgtgaccttccaggacgacgcagaactgccgttggccttcaaagcgcct
tcagctgtactggcataa
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