Shigella flexneri Shi06HN006 (serotype Yv): SFyv_3236
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Entry
SFyv_3236 CDS
T03315
Name
(GenBank) Cytidine deaminase
KO
K01489
cytidine deaminase [EC:
3.5.4.5
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00240
Pyrimidine metabolism
sfs01100
Metabolic pathways
sfs01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SFyv_3236
Enzymes [BR:
sfs01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.5 cytidine deaminase
SFyv_3236
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Paralog
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Motif
Pfam:
dCMP_cyt_deam_2
dCMP_cyt_deam_1
DUF5447
Motif
Other DBs
NCBI-ProteinID:
AIL41371
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Position
2281834..2282718
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AA seq
294 aa
AA seq
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MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSATGLDEDALAFALLPLA
AACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAISHAWLSGEKALA
AITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDYLPDAFGPKDLEIKTLLMDEQ
DHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECKDGRIFSGSYAENAAFNPTLPPL
QGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDATSATLKALGCHSIDRVLLA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcatccacgttttcaaaccgcttttgcccaacttgcggataacttgcaatctgcactg
gaacctattctggcagacaagtacttccccgctttgttgaccggggagcaagtctcatcg
ctgaagagcgcaacgggactggacgaagacgcgctggcattcgcactacttccgctggcg
gcggcctgtgcgcgtacgccattgtcgaattttaatgttggcgcaattgcgcgcggtgtg
agcggaacctggtattttggtgccaatatggaatttattggtgcaacaatgcagcaaacc
gttcatgccgaacaaagcgcgatcagccacgcttggttgagtggtgaaaaagcgcttgca
gccatcaccgttaactatacgccttgtggtcactgccgtcagtttatgaatgaactgaac
agcggtctggatctgcgtattcatttgccgggccgcgaggcacacgcgctgcgtgactat
ctgccggatgcctttgggccgaaagatctggagattaaaacgctgctgatggacgagcag
gatcacggctatgcgctgactggtgatgcgctttctcaggcggcgattgcagcggcaaac
cgttcgcacatgccttacagtaagtcaccaagcggtgtcgcgctggaatgtaaagacggt
cgtattttcagcggcagctacgctgaaaacgccgcattcaacccgactctgccgccgttg
cagggggcgttaattctgttgaatctcaagggttatgattacccggatatccagcgcgcg
gttctggcagaaaaagccgatgcgccgttgattcagtgggatgccacctccgcaacgctg
aaagctctcggctgtcacagtatcgaccgcgtgcttctcgcttaa
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