Shigella flexneri Shi06HN006 (serotype Yv): SFyv_4749
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Entry
SFyv_4749 CDS
T03315
Name
(GenBank) Mdh
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00020
Citrate cycle (TCA cycle)
sfs00270
Cysteine and methionine metabolism
sfs00620
Pyruvate metabolism
sfs00630
Glyoxylate and dicarboxylate metabolism
sfs00680
Methane metabolism
sfs00710
Carbon fixation by Calvin cycle
sfs00720
Other carbon fixation pathways
sfs01100
Metabolic pathways
sfs01110
Biosynthesis of secondary metabolites
sfs01120
Microbial metabolism in diverse environments
sfs01200
Carbon metabolism
Module
sfs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sfs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sfs_M00012
Glyoxylate cycle
sfs_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SFyv_4749
00620 Pyruvate metabolism
SFyv_4749
00630 Glyoxylate and dicarboxylate metabolism
SFyv_4749
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SFyv_4749
00720 Other carbon fixation pathways
SFyv_4749
00680 Methane metabolism
SFyv_4749
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SFyv_4749
Enzymes [BR:
sfs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
SFyv_4749
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
AIL42525
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All DBs
Position
complement(3395385..3396323)
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AA seq
312 aa
AA seq
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MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG
EDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKNCPKACIGIITNP
VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGV
TILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR
ALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLK
KDIALGKEFVNK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgcagtcctcggcgctgctggcggtattggccaggcgcttgcactactgtta
aaaacccaactgccttcaggttcagaactctctctgtatgatatcgctccagtgactccc
ggtgtggccgtcgatctgagccatatccctactgctgtgaaaatcaaaggtttttctggt
gaagatgcgactccggcgctggaaggcgcagatgtcgttcttatctctgcaggcgtagcg
cgtaaaccgggtatggatcgttccgacctgtttaacgttaacgccggcatcgtgaaaaac
ctggtacagcaagttgcgaaaaactgcccgaaagcgtgcattggtattatcactaacccg
gttaacaccacagttgcaattgctgctgaagtgctgaaaaaagccggtgtttatgacaaa
aacaaactgttcggcgttaccacgctggatatcattcgttccaacacctttgttgcggaa
ctgaaaggcaaacagccaggcgaagttgaagtgccggttattggcggtcactctggtgtt
accattctgccgctgctgtcacaggttcctggcgttagttttaccgagcaggaagtggct
gatctgaccaaacgtatccagaacgcgggtactgaggtggttgaagcgaaagccggtggc
gggtctgcaaccctgtctatgggccaggcagctgcacgttttggtctgtctctggttcgt
gcactgcagggcgaacaaggcgttgtcgaatgtgcctacgttgaaggcgacggtcagtac
gcccgtttcttctctcaaccgctgctgctgggtaaaaacggcgtggaagagcgtaaatct
atcggtaccctgagcgcatttgaacagaacgcgctggaaggtatgctggatacgctcaag
aaagatatcgccctgggcaaagagttcgttaataagtaa
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