Shigella flexneri Shi06HN006 (serotype Yv): SFyv_5780
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Entry
SFyv_5780 CDS
T03315
Name
(GenBank) Triosephosphate isomerase
KO
K01803
triosephosphate isomerase (TIM) [EC:
5.3.1.1
]
Organism
sfs
Shigella flexneri Shi06HN006 (serotype Yv)
Pathway
sfs00010
Glycolysis / Gluconeogenesis
sfs00051
Fructose and mannose metabolism
sfs00562
Inositol phosphate metabolism
sfs00710
Carbon fixation by Calvin cycle
sfs01100
Metabolic pathways
sfs01110
Biosynthesis of secondary metabolites
sfs01120
Microbial metabolism in diverse environments
sfs01200
Carbon metabolism
sfs01230
Biosynthesis of amino acids
Module
sfs_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
sfs_M00002
Glycolysis, core module involving three-carbon compounds
sfs_M00003
Gluconeogenesis, oxaloacetate => fructose-6P
Brite
KEGG Orthology (KO) [BR:
sfs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SFyv_5780
00051 Fructose and mannose metabolism
SFyv_5780
00562 Inositol phosphate metabolism
SFyv_5780
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SFyv_5780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfs04147
]
SFyv_5780
Enzymes [BR:
sfs01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.1 triose-phosphate isomerase
SFyv_5780
Exosome [BR:
sfs04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
SFyv_5780
Exosomal proteins of bladder cancer cells
SFyv_5780
Exosomal proteins of melanoma cells
SFyv_5780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIM
Motif
Other DBs
NCBI-ProteinID:
AIL43288
LinkDB
All DBs
Position
complement(4139470..4140237)
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AA seq
255 aa
AA seq
DB search
MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIM
LGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQG
LTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATP
AQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKAD
AFAVIVKAAEAAKQA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcgacatcctttagtgatgggtaactggaaactgaacggcagccgccacatggttcac
gagctggtttctaacctgcgtaaagagctggcaggtgttgctggctgtgcggttgcaatc
gcaccaccggaaatgtacatcgatatggcgaagcgcgaagctgaaggcagccacatcatg
ctgggtgcgcaaaacgtggacctgaacctgtccggcgcattcaccggtgaaacttctgcc
gctatgctgaaagacatcggcgctcagtacatcatcatcggccactctgaacgtcgtact
taccacaaagagtctgacgaactgattgcgaaaaaattcgcggtgctgaaagagcagggt
ctgactccggttctgtgcatcggtgaaaccgaagctgaaaacgaagcgggaaaaactgaa
gaagtttgcgcacgtcagatcgacgcggtactgaaaactcagggtgctgcggcattcgaa
ggtgcggttatcgcttacgaacctgtatgggcaatcggtactggcaaatctgcaactccg
gctcaggcacaggctgttcacaaattcatccgtgaccacatcgctaaagttgacgctaac
atcgctgaacaagtgatcattcagtacggcggctctgtaaacgcgtctaacgctgcagaa
ctgtttgctcagccagacatcgacggcgcgctggttggcggtgcttctctgaaagctgac
gctttcgcagtgatcgttaaagctgcagaagcggctaaacaggcttaa
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