Shigella flexneri NCTC1 (serotype 2a): NCTC1_01796
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Entry
NCTC1_01796 CDS
T03751
Symbol
nth
Name
(GenBank) endonuclease III,Endonuclease III,endonuclease III,3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase,endonuclease III,HhH-GPD superfamily base excision DNA repair protein
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC1_01796 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sft03400
]
NCTC1_01796 (nth)
Enzymes [BR:
sft01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC1_01796 (nth)
DNA repair and recombination proteins [BR:
sft03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC1_01796 (nth)
Prokaryotic type
NCTC1_01796 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
P_gingi_FimA
Motif
Other DBs
NCBI-ProteinID:
CDX07013
UniProt:
A0AA87AFB0
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All DBs
Position
1:1656687..1657322
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AA seq
211 aa
AA seq
DB search
MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDISVNKATAKLYPVANT
PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEYKEKVDI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcaaaacgtctggagatcctcactcgcctgcgtgagaacaatcctcatccc
accaccgagcttaatttcagttcgccttttgaattgctgattgccgtactgctttccgct
caggcgaccgatatcagtgttaataaggcgacggcgaaactctacccggtggcgaatacg
cctgcagcgatgcttgaactaggcgttgaaggggtgaaaacctatatcaaaacgattggc
ctttataacagcaaagcagaaaatatcatcaaaacctgccgtatattactggaacaacat
aatggcgaggttccggaagatcgtgctgcgcttgaagccctgcccggcgtaggtcgtaaa
acagccaacgtcgtattaaacactgcattcggctggccgactattgctgtcgacacgcac
attttccgcgtttgtaatcgtactcaatttgcgccggggaaaaacgtcgaacaggtagaa
gaaaagctactgaaagtggttccggcagagtttaaagtcgactgccaccattggttgatc
ctgcacgggcgttatacctgcattgcccgcaagccccgctgtggctcttgtattattgaa
gatctttgtgaatacaaagagaaagttgacatctga
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