Shigella flexneri NCTC1 (serotype 2a): NCTC1_02683
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Entry
NCTC1_02683 CDS
T03751
Symbol
ypdA
Name
(GenBank) YpdA, sensory kinase in two-component system with YpdB,Inner membrane protein ypdA,Predicted signal transduction protein with a C-terminal ATPase domain,phosphate regulon sensor kinase PhoR,Histidine kinase
KO
K27884
two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:
2.7.13.3
]
Organism
sft
Shigella flexneri NCTC1 (serotype 2a)
Pathway
sft02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sft00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC1_02683 (ypdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sft01001
]
NCTC1_02683 (ypdA)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sft02022
]
NCTC1_02683 (ypdA)
Enzymes [BR:
sft01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
NCTC1_02683 (ypdA)
Protein kinases [BR:
sft01001
]
Histidine kinases
LytTR family [OT]
NCTC1_02683 (ypdA)
Two-component system [BR:
sft02022
]
LytTR family
PyrS-PyrR (pyruvate reutilization)
NCTC1_02683 (ypdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_kinase
HATPase_c
GAF
GAF_2
SpoVT_C
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
CDX07850
UniProt:
A0AB33SHQ4
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All DBs
Position
1:2463887..2465008
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AA seq
373 aa
AA seq
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MYIRLDKPENPQSTALALDIANKTLPLFRHVNSESLRKVCEIIRDDIHADAVAITNTDHV
LAYVGVGEHNYQNGDDFISPTTRQAMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVT
GTLKIYYCHAHQITSSLQEMAVGLSQIISTQLEVSRAEQLREMANKAEIRALQSKINPHF
LFNALNAISSSIRLNPDTARQLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQA
RFGDKLTVIYDIDEEVNCCIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIA
VRDTGHGIVPKVIERVEANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFYIPN
QRTPVASQATLLL
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgtatatcaggctggataaacctgaaaatccccaaagcacagcgctggcgctggatatc
gccaacaaaacgctaccgctgtttcgccatgtcaatagcgagtcattacgcaaggtctgc
gaaattatccgcgatgacattcacgccgatgcggtggcgattactaataccgatcatgtg
ctggcctatgttggcgtgggtgaacataactatcagaatggcgatgacttcattagcccg
actacccgtcaggcgatgaattacggaaaaatcatcattaaaaacaatgatgaagcccac
cgcacaccagagattcattccatgctggtgatcccattgtgggagaaaggggtcgtgacc
ggaacgctgaaaatttactactgccacgcgcatcagatcacctcgtcattacaggaaatg
gcggtcggtctgtcgcaaatcatctccacgcaactggaggtttcacgcgccgagcagcta
cgtgaaatggcaaataaggcagagattcgcgccctgcaaagcaaaattaatccccatttt
ctgtttaacgctctgaacgctatttcatcgtcaatccgtctgaatccggataccgctcgc
cagttgatctttaatctgtcgcgttatctgcgctataacattgaattaaaagacgatgag
caaatcgatatcaaaaaagagctgtatcaaattaaagactatattgccattgagcaggcc
cgctttggcgacaagctgacggttatctatgatattgatgaagaggtgaattgctgcatt
cccagcctgctgatccagccgttggtggagaacgccattgtccacggtattcagccttgc
aaaggtaaaggcgttgtcaccatcagcgttgcagagtgcggaaatcgggtacgcattgcg
gtgcgagataccgggcacggcatcgttccaaaggtgattgagcgggtcgaagcgaatgaa
atgccgggcaataaaattggcctgctgaatgtccatcatcgcgtgaagttattgtatggc
gaggggctgcatatccgccgcctggagccggggacggaaattgcgttttacattcctaac
caacgcaccccagtcgcctcacaggctacgttattgctttga
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