Syntrophobacter fumaroxidans: Sfum_1985
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Entry
Sfum_1985 CDS
T00418
Name
(GenBank) Radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
sfu
Syntrophobacter fumaroxidans
Pathway
sfu00790
Folate biosynthesis
sfu01100
Metabolic pathways
Module
sfu_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
sfu00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Sfum_1985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfu03016
]
Sfum_1985
Enzymes [BR:
sfu01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Sfum_1985
Transfer RNA biogenesis [BR:
sfu03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Sfum_1985
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
AlaDh_PNT_N
zf-CHCC
Motif
Other DBs
NCBI-ProteinID:
ABK17668
UniProt:
A0LJR6
LinkDB
All DBs
Position
complement(2428548..2429195)
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AA seq
215 aa
AA seq
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MALRVNEIFHSIQGESGYAGWPCVFVRLTGCNLRCSYCDTRYAYDEGDFVTLREIIGRVR
RFDCPLVEITGGEPLLQPETPELVAELLDLGHTVLVETNGSMDISVVDRRCVKIVDFKCP
SSGESDANDMENLERLGSRDEIKCVIGTREDYEFAREIERLAAERAGTGSTVCFSPVFGK
LEPRELAEWILADRLRVRLGLQLHKIIWEPDTRGV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctgcgggtgaacgagatcttccacagcatccagggggaatccgggtatgcggga
tggccctgcgtgttcgtgcgattgaccgggtgcaacctgcgctgctcctattgcgacacc
cggtacgcctacgatgaaggagacttcgtcaccctgcgggagatcatcggccgggtgcgt
cggttcgactgcccgctggtggaaatcacggggggggagcctcttctccaaccggaaact
ccggagcttgtcgcagaactgctcgacctgggccacacggtgctggtcgagaccaacggc
agcatggacatctccgtggtggaccgccgctgcgtgaagatcgttgatttcaagtgtccg
tcgagcggcgagtcggacgccaatgatatggagaacctggagcgcctgggatcgcgtgac
gagatcaagtgcgtcatcggaacgcgggaggattacgaatttgccagggagatcgagcgg
ttggcagcggaacgggccggaaccggcagcacggtttgtttttctcccgttttcggcaaa
ttggagccgagggaactggctgagtggatccttgccgatcgtctgcgagtccggctcggg
ttacagctccacaagatcatctgggagccggatacacgaggagtctga
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