KEGG   Sorex fumeus (smoky shrew): 130016297
Entry
130016297         CDS       T10594                                 
Name
(RefSeq) LOW QUALITY PROTEIN: survival of motor neuron-related-splicing factor 30-like
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130016297
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sfum03041]
    130016297
Spliceosome [BR:sfum03041]
 Complex A
  U2 snRNP components
   U2 related factors
    130016297
 Complex B
    130016297
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    130016297
SSDB
Motif
Pfam: SMN_Tudor DUF4349
Other DBs
NCBI-GeneID: 130016297
NCBI-ProteinID: XP_055962949
LinkDB
Position
Unknown
AA seq 189 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSGTLTS
SDSFASIQPTHSWKVGDKCMAIWSEDGPXYLYRCYQAEIEEIDEENGTAAITFAGYGNAE
VTPLLNLKPVEEGRKAKEDSGSKPMSNSSFVLHFNVCTNSIKLSKLIKIQKNMLILSLDG
NQDCYFTIH
NT seq 570 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagcaaaacagctagccagctacaaagctcaacttcaacaagtagaa
gctgcattgtctggaaatggagagaatgaagatttactcaaactaaagaaagatttacaa
gaagttatagaactaacgaaagaccttctgtcaactcaaccttctggaactcttacaagt
tcagacagttttgcttctatccagcctactcattcatggaaagtaggagacaagtgtatg
gcaatctggagtgaagatggaccatgatatctttacaggtgttaccaagcggagattgag
gagatagatgaagaaaacggcactgctgcaatcacctttgctggctatggcaatgctgaa
gtaacaccattgttgaatctcaagcctgtagaagaaggaaggaaggcaaaggaggacagt
ggcagcaaacccatgtcaaactcctcttttgttctgcacttcaatgtgtgcacaaactca
ataaagttaagcaaattgataaagatccagaaaaatatgctaatattatctttagatggg
aatcaagattgttactttaccatccactga

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