Sorex fumeus (smoky shrew): 130017430
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Entry
130017430 CDS
T10594
Symbol
DHX9
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfum03041
]
130017430 (DHX9)
03012 Translation factors [BR:
sfum03012
]
130017430 (DHX9)
Enzymes [BR:
sfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130017430 (DHX9)
5.6.2.6 RNA 3'-5' helicase
130017430 (DHX9)
Spliceosome [BR:
sfum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130017430 (DHX9)
Translation factors [BR:
sfum03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
130017430 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
nSTAND3
AAA_19
AAA_14
ATPase
AAA_22
PhoH
Motif
Other DBs
NCBI-GeneID:
130017430
NCBI-ProteinID:
XP_055964119
LinkDB
All DBs
Position
Unknown
AA seq
1362 aa
AA seq
DB search
MGDIKNFLYAWCGKRKMTPAYEIRAVGNKNRQKFMCEVRVEGFNYTGMGNSTNKKDAQSN
AARDFVNYLVRINEVKSEEVPAVGIAPPPPTLTDSTDAAATTTTTTTTTTGSAPAPMGGP
LPPHLALQAENNNNNSAPGATGATGATGASGASGASGYGPPGSWDRTGNSNMKDYYSTKE
EQEVQATLESEEVDLNAGLHGNWTLENAKARLNQYFQKEKIQGEYKYTQVGPDHNRSFIA
EMTIYIKQMGRRIFAREHGSNKKLAAQSCALSLVRQLYHLGVIEAYSGLTKKKEGETVEP
YKVNISQDLEHQLQNVIQELELEIMPPPEDPTVPVALNLGKLAHFEPAQRQNQVGVVPWS
PPQSNWNPWTSSNIDEGPLAYATPEQISMDLKNELMYQLEQDRDLQAVLQERELLPVKKF
ENEILEAISQNSVVIIRGATGCGKTTQVPQFILDEFIQSDRAAECNIVVTQPRRISAVSV
AERVAYERGEEPGKSCGYSVRFESVLPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEI
HERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPVQEY
FLEDCIQMTHFIPPPKDKKKKEKDDDGGEDDDANCNLICGDEYGPETKISMSQLNEKETP
FELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPRE
EQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWA
SKTNLEQRKGRAGRVRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIKLLRLGGI
GQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRLGKMMIMGCI
FYVGDAVCTISAATCFPEPFISEGKRLGYIHRNFAGNRFSDHVALLSVFQAWDDARMGGE
EAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFPEDCLLTQVFTNTGPDNNLDVVIS
LLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRA
ISAKGMTLVTPLQLLLFASKKVFSDGQIVLVDDWIRLQISHEAAACITALRAAMEALVVE
VTKRPDIISQLDPVNERMLNMIRQISRPSAAGISLMMGAARYGDGPRPPKMARYDNGGGY
GSYGSGYRRGGSSYGGGGYGSGGYGHGGGGYGSGGYGHGGGGGGYGMGRGYGGGGGGGGG
FXGGGGYGGGHGGGPNNYMGGYGPGGGGPGGGGGFRGPMRGGFRGGSGGDFRGGSGGDFR
GGGGGDFRGAGGGFRGHGGFRGHGGFGGGGGYFGQGRGGGGY
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacattaagaatttcctgtatgcctggtgcggcaaaaggaagatgactcctgcc
tacgagatcagagccgtggggaacaagaacaggcagaagttcatgtgcgaggtccgcgtg
gaaggcttcaattacacgggcatgggcaattccaccaacaagaaggacgcccagagcaat
gccgcgagagacttcgtcaactacctggtgcggatcaacgaggtgaagagtgaggaggtc
ccggccgtcgggatcgcgccccctccgccgaccctcaccgactccacggacgccgctgcc
accaccacgactaccacgaccaccacaactgggagcgcccccgcgcccatggggggcccg
ctgcccccgcacctggcactgcaagcagagaacaacaacaacaactctgcccctggggcc
actggggccaccggggccactggggcctccggggcctccggggcctccggctacgggccg
cccgggtcctgggacaggacggggaactccaacatgaaggactactactcgaccaaggag
gagcaggaggtccaagcgaccctggaatccgaggaggtggacttgaatgccggactgcac
ggaaactggaccttggaaaacgctaaggcgcgcctgaaccagtattttcagaaagaaaag
atccagggagaatataagtacacccaagtgggccccgaccacaacaggagctttattgca
gaaatgaccatttatatcaagcagatgggcagaaggatttttgcacgtgaacacgggtca
aataagaagctggccgcccagtcctgtgccctgtccctcgtcaggcagctctaccatctc
ggagtgatcgaagcttattccgggctcaccaagaagaaggaaggcgagaccgtggagccc
tacaaggtgaacatctcccaggacctggagcaccagctgcagaacgtcatccaggagctg
gagctggagatcatgcccccgcccgaggaccccacggtgcccgtcgcgctcaacctcggc
aaactggctcacttcgagcccgcgcagcgccagaaccaggtgggcgtggtcccgtggtcc
ccgccgcagtccaactggaacccctggaccagcagcaacatcgacgaggggcccctcgcc
tacgccaccccggagcagatcagcatggacctcaagaacgagctcatgtaccagttggag
caggatcgcgacttgcaggcggttctgcaggagagagagttgctgcccgtgaagaagttt
gaaaacgagatcctggaagccattagtcagaattcggttgtcattatccggggtgccact
ggctgcgggaagaccacccaggtgccccagttcattctcgacgagtttatccagagcgac
cgagccgccgagtgcaacatcgttgtgactcagccccggagaatcagcgccgtgtccgtg
gcagagcgcgtggcctacgagcgaggagaggagcccgggaagagctgcggctacagcgtc
cgtttcgagtccgtgcttccgcggccgcacgccagcatcatgttctgcaccgtgggtgtg
ctcctgaggaagctggaggcgggcattcgcgggatcagccacgtcatcgtggacgagatc
cacgagagagacattaacaccgatttcctcctggtcgtgctgcgggatgtggtccaggcc
taccccgaggtccgcatcgtgctcatgtcggccaccatcgacaccaccatgttctgtgaa
tatttcttcaattgccccatcatcgaggtgtacgggaggaccttccccgtccaggagtac
ttcctggaagactgcattcagatgacccacttcattccgccaccgaaggacaagaagaag
aaagagaaggatgacgacggtggcgaggatgatgatgccaactgcaatctgatctgtggt
gacgagtacggcccggaaaccaagatcagcatgtcgcagctgaacgagaaggagactcct
ttcgaactcatcgaggcgcttctgaagtacatcgaaacccttaacgttcccggtgctgtg
ttggtctttctgcccggctggaatttgatttatacgatgcagaagcatttggaaatgaac
ccccattttgggagtcaccggtaccagatcctgccactgcactcacagatcccacgcgag
gagcagcgcaaagtcttcgacccggtgccagacggggtgaccaaggtgattttgtccacg
aacattgccgagaccagcatcaccataaatgacgtcgtctatgtcattgactcctgcaag
cagaaggtgaagctgttcacggcgcacaacaacatgaccaactacgccacggtctgggcg
tccaagaccaacctggagcagcgcaagggccgcgccggccgcgtgcgccccggcttctgc
ttccacctctgcagccgcgcccgcttcgagaggctcgagacgcacatgacccccgagatg
ttccggaccccgctgcacgagatcgccctgagcatcaagctgctccgtctgggcgggatc
ggccagttcctggccaaggccatcgagcccccgccgctggacgctgtgatcgaggctgag
cacacgctccgagagctggacgccctggacgccaacgacgagttgactcctctggggcga
atcctggcgaagctccccatcgagccccgtctcggcaagatgatgatcatgggctgcatc
ttctacgtgggcgacgccgtgtgcaccatctcggccgccacctgcttccccgagccgttc
atcagcgagggcaagcggctcggctacatccaccgcaacttcgcggggaaccgcttctcc
gaccacgtggcgctgctgtccgtcttccaggcgtgggacgacgccaggatggggggcgaa
gaggccgagatccggttctgtgagcacaagaggctcaacatggccacgctgagaatgacc
tgggaggccaaggtccagctcaaggagatcctgatcaactcgggcttccccgaagactgc
ctgctgacccaggtcttcaccaacacggggccggacaacaacctggacgtggtcatctcc
ctgctggccttcggcgtgtaccccaacgtgtgctaccacaaggagaagcgcaagatcctc
accaccgagggccgcaacgccctcatccacaagtcctcggtcaactgccccttcagcagc
caggacatgaagtacccgtcgcccttcttcgtgttcggggagaagatccgcacccgggcc
atctccgccaagggcatgaccctcgtcaccccgctgcagctgctgctcttcgcctccaag
aaggtcttctcggacgggcagatcgtgctggtggacgactggatccgcctgcagatctcg
cacgaggccgcggcctgcatcacggcgctgcgggcggccatggaggcgctggtggtggag
gtcaccaagcggcccgacatcatcagccagctggaccccgtcaacgaacgtatgctcaac
atgatccgccagatctcgcggccctcggcggccggcatcagcctcatgatgggcgccgcc
cggtacggagacgggccccggccccccaagatggcccgctacgacaacggcggcggctac
ggcagttacggcagcggctaccgccggggcggctccagctacggtggtggcggctatggc
agcggcggctatggccacggcggcggcggctacggcagcggtggctacggccacggcggt
ggtggcggcggctacggcatgggcagaggctacggcggagggggcggcggcggaggaggc
tttnnggggggtggcggctacggaggtggccacgggggtggccccaacaactacatggga
ggctacgggcccgggggcggcggacccgggggtggcgggggcttccgcggccccatgcgc
gggggcttccggggcggctcggggggagacttccgaggcgggtcaggtggggacttccga
ggtggcggcggcggagacttccggggagccggtgggggcttccgaggacacgggggcttc
cgggggcacgggggctttggggggggtgggggctattttggacagggaagagggggcggg
ggctactag
DBGET
integrated database retrieval system
