Sorex fumeus (smoky shrew): 130018534
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Entry
130018534 CDS
T10594
Symbol
TIAM1
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04014
Ras signaling pathway
sfum04015
Rap1 signaling pathway
sfum04024
cAMP signaling pathway
sfum04062
Chemokine signaling pathway
sfum04530
Tight junction
sfum04810
Regulation of actin cytoskeleton
sfum05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
130018534 (TIAM1)
04015 Rap1 signaling pathway
130018534 (TIAM1)
04024 cAMP signaling pathway
130018534 (TIAM1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130018534 (TIAM1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
130018534 (TIAM1)
09150 Organismal Systems
09151 Immune system
04062 Chemokine signaling pathway
130018534 (TIAM1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
130018534 (TIAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfum04990
]
130018534 (TIAM1)
Domain-containing proteins not elsewhere classified [BR:
sfum04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
130018534 (TIAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
RNA_pol_Rpc82
Motif
Other DBs
NCBI-GeneID:
130018534
NCBI-ProteinID:
XP_055965239
LinkDB
All DBs
Position
Unknown
AA seq
1611 aa
AA seq
DB search
MGNAESQNVEHEFYGEKHASLGRKHTSRSLRLSHKARRSRHASSGKAIHRHSEVSTRSSS
TPSIPQSLAENGLEPFSPEGPLEDFEGPIWVDRVGLGLRPVSYTDSSIAPHVDGSLVLTA
ASVQSMPEPEQSRGLYGGGGGRCLAAGGRQPRPYATSSSSGGPVFMETASFKKKRSKSAD
IWREDSLEFSLSDLSQEHFTSNEEILGSAEEKDGEEPGGMGTQASPRPRGSCQRANSLGN
LYPPQKTTAVSAAVTAAGAANGGPGGKFAGYGRNLVSDIPDLASHKVPAAATDEGLPYSN
YNTLPCRKSHCLSEGATNPQISHSNSMQGRRAKTTQDVNAGEGSEFADSGIEGAATDTDL
LSRRSNATTASYSPPAGRAFVGSDSGSSSAGGDAARQGVYENFRRELELSTTHSESLEDA
GSAHSDEQSSGTLSSPGQSDLLLSAAQGTVRKAGALAVKNFLVHKKSKKVESATRRKWKH
YWVSLKGCTLFFYEGDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDA
FLFQTTSQTELENWITAVHSACAAAVARHHHKEDTLRLLRSEIKKLEQKIDMDEKMKKMG
EMQLSSVTDSKKKKTILDQVFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFAS
RPTKVAMGRLGIFSVSSFHALVAARTGETGVRRRTQAMSRSASKRRSRFSSLWGLDTTSK
KKQGRPSINQVFGEGTDAVKKSLEGIFDDTVPDGKRDKDLVLPSVHQHNPDCDIWVHEYF
TPSWFCLPNNQPVLTVVRPGDTARDTLEMICKMHHLDHSAHYLRLKFLIENKMQHYVPKP
EEDIYELLYKEIEICPKVTQNIQIEKSDAAGDNYGFSLSSVEEDGVRRLYVNSVKETGLA
SKKGLKAGDEILEINNRPAGSLNSSALKDCLSQPALGLLVRTYPPPEGAAALLDSPPHRV
DSTTDPGDSPLALLASNPGHSVGSEPSSSAETPPEESEGPDLESSDETDHSSKSTEQVSA
FCRSLHEMSSSDTSPSPQDPSGPQLATMRQLTDADKLRKVICELLETERTYVKDLNCLME
RYLKPLQKETFLTQDELDVLFGNLTEMVEFQVEFLKTLEDGVRLVPDLEKLEKVDQFKKV
LFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDPAFKAFLDAQNPRQQHSATLES
YLIKPIQRILKYPLLLKELFALTDAESEEHYHLDVAIKTMNKVASHINEMQKIHEEFGAV
FDQLIAEQTGEKKEVADLSMGDLLLHTTVVWPNPPASLGKWKKEPELAAFVFKTAVVLVY
KDGSKQKKKLVGSHRLSIYEDWDPFRFRHMIPTEALQVRALASADAEANTVCEIVHVKSE
SEGRPERVFHLCCSSPESRKEFLKAVHSILRDKHRRQLLKTESLPSSQQYVPFGGKRLCA
LKGARPAMSRAVSAPSKSLGRRRRRLARNRFTIDSDAISASSPEKEPQQPPGGGGSGSGG
DTDRWVEEQFDLAQYEEQEDIKETDILSDDDDFCEAVRGEDRELQERLQAASIGQRERGR
RTLDSHASRMTQLKKQAALSGLNGGPESPGEEVIWVRREDFAPSRKLNTEI
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgccgaaagccagaatgtagagcacgagttttacggtgagaagcacgccagc
ctggggcgcaagcacacctcccgctccctgcggctgtcacacaaggcacggcgcagccgg
cacgccagctcggggaaggccatccaccggcactcggaggtcagcacccgctcgagcagc
acgcccagcatcccccagtcactggccgagaatggcctggagcccttctcgccggagggg
cccctggaggacttcgagggccccatctgggtggaccgggtggggctgggcttgagaccc
gtgtcctacacggactcctccatcgccccccacgtggacggcagcctggtgctcacggcc
gcctccgtgcagagcatgccggagcccgagcagagccgggggctgtacggcggcgggggt
gggcgctgcctggcagcgggaggcaggcagccgcggccctacgccacctcctcctcctcg
ggcgggcccgtgttcatggagacggccagcttcaagaagaagcgctccaagtcggctgac
atctggcgggaagacagcctcgagttctccctctcggatctgagccaagagcacttcacc
agcaacgaggagatcctgggctcggccgaggagaaagacggcgaggagccggggggcatg
ggcacccaggccagcccgcgcccacggggctcttgccagcgcgccaactccctgggcaac
ctgtacccaccgcagaagaccacagcggtgtccgcggcggtgacagcggcaggcgcggcc
aacgggggccccggcggcaaatttgcgggctatggccggaacctggtgtcggatattccc
gatctggcgagccacaaggtgccagctgccgccaccgacgaggggcttccctacagcaac
tacaacacgctgccctgccggaaatctcactgtctctccgagggggccaccaacccccag
atcagccacagcaacagcatgcaaggcaggagggccaagaccacacaggatgtcaacgcg
ggcgagggcagcgagttcgccgacagcggcatcgagggcgccgccaccgacacggacctg
ctgtcacggcgctccaatgccacgaccgcgagctactcgccgcccgctgggcgcgccttc
gtgggcagtgacagcggcagcagctcagctggtggcgacgcggcccgccagggcgtgtac
gagaacttcaggcgggagctggagctgagcacgacgcacagtgagagcctggaggacgcg
ggctcggcacacagtgatgagcagagcagtggcacgctcagctcgcctggccagtcggac
ctcttgctctcggccgcacagggcaccgtgcgcaaggcgggcgcgctcgccgtcaagaac
ttcctcgtgcacaagaagagcaagaaggtcgagtcggccacgcgccgcaagtggaagcac
tactgggtgtccctgaaaggatgcacgctcttcttctacgaaggcgatggccggtctggg
atcgaccacaacagcatccccaaacacgccgtctgggtggagaacagcatcgtgcaggcc
gtgcctgagcaccccaagaaggatttcgtcttctgcctcagcaattccctgggcgatgcc
ttcctcttccagacgaccagccagacggagctggaaaactggatcaccgccgtgcactca
gcctgcgctgccgccgtggccagacaccaccacaaggaagacacccttcgcctcctgcgg
tcagagatcaagaaactggagcagaagatcgacatggatgagaagatgaagaagatgggc
gaaatgcagctgtcttccgtcactgattccaagaagaagaaaacgatattagaccaggtc
ttcgtctgggagcagaacctcgaacagttccaaatggacctcttccgttaccgctgctat
ttagctagccttcagggtggggagctgccgaaccccaaaaggctacttgccttcgccagc
cggccaacgaaggtggccatgggccgcctgggcatcttctctgtctcgtctttccatgcc
ctggtggcagcacgcacaggagagaccggagtgaggcggcgaactcaggccatgtcccgg
tctgccagcaagcggaggagcaggttttcctccctctgggggctggacaccacgtctaag
aagaagcagggtcgccccagcatcaatcaggtgttcggggagggcacggacgctgtcaag
aaatctttagaggggatattcgatgacaccgttccagatggcaagagggacaaagacctg
gtcttacccagcgtccaccagcacaatcctgactgtgacatttgggtccacgagtatttc
acaccctcctggttctgtctgccgaataaccagccagtcctgacggtggtccggccgggg
gacactgcccgtgacactctggagatgatctgcaagatgcatcacctggaccattctgct
cattacctgcgtctgaaatttctgatcgagaacaaaatgcagcactatgtccccaagccc
gaggaggacatctatgagctgctgtacaaagaaattgaaatttgtccaaaagtcactcag
aacatccagattgagaagtcagacgctgccggtgataattatgggttctcgctgtcttct
gtggaggaggacggggtgcgcagactgtacgtgaacagcgtcaaggaaacgggtttagcg
tctaagaaaggcctgaaggcgggcgatgagattctcgagatcaataaccggcccgccggc
agcctcaactcgtcggcgctcaaagactgcctctcacagccagcgctgggcctcctggtg
aggacctaccccccgcccgagggggcagcggctcttctggacagcccgccccaccgcgtg
gacagcaccacagacccgggcgacagtcccctggccctgctggccagcaacccaggacac
agcgtgggcagtgagccgagcagcagtgccgaaacccccccagaggagagcgaagggccg
gacctggaatcctctgatgagacggatcacagcagcaagagcacggaacaggtgtcggcc
ttctgccggagcctgcatgagatgagctcctcggacaccagcccatccccgcaggacccc
agcggcccgcagctggccaccatgcggcagctcacagacgccgacaagctgcgcaaggtc
atctgcgagctgctggagacggagcggacctacgtgaaggacttgaactgtctcatggag
cgatacctgaaacctcttcagaaggagacttttctcacccaagatgagctggatgtgctc
tttggaaatctcaccgaaatggtcgagttccaagttgaattcctgaaaacgctcgaagac
ggcgtgaggctggtccccgacttggaaaagctggagaaagtcgaccaattcaagaaagtg
ctgttctccctgggaggctcattcctctactatgccgaccgcttcaagctctatagtgcc
ttctgcgccagccacacgaaggtccccaaagttctggtgaaagccaagacagacccagct
ttcaaggccttcctggacgcccagaacccgaggcagcagcactcggccacgctggagtct
tacctcatcaagcccatccagagaatcctcaagtacccgctgctgctgaaggagctgttt
gctctgacggacgctgagagcgaggagcactatcatctggacgtggccatcaagaccatg
aacaaggtcgcaagtcatatcaatgaaatgcagaagattcacgaagagtttggagccgtg
tttgaccagctgattgccgagcagacaggggagaaaaaggaggtcgcggatctgagcatg
ggggacctgctgctacacaccactgtggtctggcccaaccccccggcctccctggggaag
tggaaaaaggagccagagttggcggccttcgtcttcaaaactgctgtggtcctggtgtac
aaagatggttccaaacagaagaagaaactcgtaggatctcaccgactctccatctatgag
gactgggatcccttccggttccggcacatgatccctaccgaggctctgcaggttcgagct
ttggcaagtgcagacgcagaagccaacaccgtgtgtgaaattgtgcatgtcaaatcggag
tctgaagggaggccggagagagtctttcacctgtgttgcagctctccggagagccgaaag
gaattcctgaaggccgtgcattccatcctgcgtgataagcacagaagacagctcctcaaa
acggaaagccttccctcgtcccagcaatatgtcccctttggaggaaagagattgtgtgcg
ttgaaaggggccaggccggccatgagcagggcagtgtccgcccccagcaagtcccttggg
agaaggcggcggcgactggcccgtaacaggtttaccattgactccgatgccatctcggcc
agcagccccgagaaggagccccagcagccccccggcggcggcggcagcggcagcggcggg
gacactgaccgctgggtggaggagcagtttgacctcgcgcagtacgaggagcaggaggac
atcaaggagacggacatcctgagcgacgacgatgacttctgcgaggcggtgcgcggcgag
gaccgggagctgcaggagcggctgcaggcagcgtccatcggccagcgggagcgcggccgc
cgcaccctggacagccacgcgtcgcgcatgacgcagctcaagaagcaggcggcgctgtcg
ggcctcaacgggggccccgagtcgccgggcgaggaggtcatctgggtccggcgcgaggac
tttgccccgtcccggaaactcaacacggagatctga
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integrated database retrieval system
