Sorex fumeus (smoky shrew): 130020058
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Entry
130020058 CDS
T10594
Symbol
PTPRC
Name
(RefSeq) receptor-type tyrosine-protein phosphatase C isoform X1
KO
K06478
receptor-type tyrosine-protein phosphatase C [EC:
3.1.3.48
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04514
Cell adhesion molecules
sfum04660
T cell receptor signaling pathway
sfum04666
Fc gamma R-mediated phagocytosis
sfum05132
Salmonella infection
sfum05340
Primary immunodeficiency
Brite
Enzymes [BR:
sfum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
130020058 (PTPRC)
Protein phosphatases and associated proteins [BR:
sfum01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
130020058 (PTPRC)
CD molecules [BR:
sfum04090
]
Proteins
130020058 (PTPRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130020058
NCBI-ProteinID:
XP_055966662
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Position
Unknown
AA seq
1141 aa
AA seq
DB search
MTMYLWLKLLAFGFAFLDTVEFVTGQTPTPNTDNSIAPSTPSPAESIVTPNASTTIASSV
LPSPTPEQSCDDDKLANISVNYTYVDGSKPFTARLQVNENLTCDGTPCENYTIQNLIECQ
RYNITITNGTCNYTFQLYVPPAPKKFYLTDCTKDEKANSSICLNIKSDNFTCNKTEFSYI
FQCGNMKENPTKNSTKEFNAVPDKNYICHADILYKEQKFAHKQINVKTDVGVPKKPWNLS
CNDTTKESSEIKWQFENSSSYYFELFINNSDKYYNVSQRSYKVENLSPYTQYSVSLIASI
WGRVQRRGPAETCSFRTNASRPEKVRNLKVAFVADNSVDVTCVRPINLNGPEGEYVLTVE
KNNEQVRKDKKKDCKFSVKDLQYSTKYIFKVLYNNKHHDGETETKTETTYYNSKALIIFL
VFLIIVTSIALLVVLYKIYDLHKKRSSDLGEIIGLVDKDEKLMTVEPIHSDVLLETYKRK
IADEGRLFLEEFQSIPRVFIKYPCKDARKPINQNKNRYVDILPYDYNRVELSDINGDAGS
TYINASYIDGFKEPRKYIAAQGPRDETVDDFWRMIWEQKATVIVMVTRCEEGNRNKCAEY
WPSMEEGTRNYGDVVVKVLNCKRCPDYIIQKMNITNKKEKTNGREVTHIQFTSWPDHGVP
DDPHLLLKLRRRVNAFSNFFSGPIVVHCSAGVGRTGTYIGIDAMLEKLEAENEVDVYGYV
VKLRQQRCLMVQVEAQYILIHQALVEYNQFGETEVSLSELHSYLYNTKKRDPPSDPSPLE
AEFQRLPTYRNWRTQHTGNQEENKNKNRNSYVIPYDFNRVPLKHELEMSKESEQESDESS
DDDSDSEETSKYINASFIMSYWKPEMMIATQGPLKDTIGDFWEMIFQRKVKIIAMLTDLK
NGDQEYCAQYWVEGKQTYGEIEVNMKDTNKYSAYTIRVFELTHSKKKDCRTVYQYQYNKW
SAEELPTEPKDLISMIQNLKEKLPKNSSTEGTRSHKNVPLLVHCRDGSQQTGVFCALFNL
LDSAETEEVIDVFQVVKSLRKARPGMIPSFEQYQFLYDAMASLYPPQNGQIKENNNKEDK
IQFDNEVDKVKQDANCVSPLSKTEKDHEEKKEDEVSKPTNDTEGPEHSANGPASHTFTQS
A
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgtatttgtggcttaaactgttggcattcggttttgcctttctggacacagtt
gagtttgtgactggacaaacccctactcctaatactgataactccattgcaccatccact
ccaagccctgcagaaagcattgtcactccaaacgcttccacaacaatagcctcttctgta
cttccttctccaactccggaacagtcctgtgatgatgacaaacttgcaaatatctctgtg
aactacacatatgttgatggaagtaaaccttttactgccagactacaagttaatgaaaac
ctgacttgtgacggtacaccctgtgaaaattacacaatccaaaatctcatagaatgccaa
agatacaatattactataactaatgggacatgtaattatacctttcaattatatgtacca
ccagctcctaaaaaattttatttgactgactgtacaaaggatgaaaaagcaaatagttct
atttgtttaaatataaagagtgataattttacttgcaataaaacggaattctcatacata
tttcaatgtggtaatatgaaagaaaatcctacaaagaacagcactaaagaattcaatgct
gttccagacaaaaattatatttgtcatgcagatatactctataaagaacaaaagtttgcc
cataaacagataaacgttaaaacagatgttggagttcccaaaaagccttggaatctttct
tgtaatgatacaactaaagaaagcagtgagattaagtggcagttcgagaacagctcttct
tattattttgaacttttcatcaataattcagataaatactacaacgtgagtcagaggagt
tacaaagtggagaatctgagtccttacacacagtattctgtctcattaattgcctccatc
tggggaagagtgcaacgccgtggacctgctgaaacatgtagttttcgaacaaatgcctca
cgtccagaaaaggtcagaaatttgaaagttgcttttgtcgcagacaattctgtggatgtg
acttgtgttcgtcccataaatcttaatggtcctgaaggagaatatgttttaactgtcgag
aaaaataatgaacaggttagaaaagataagaagaaggactgtaagttctcagtaaaagat
cttcagtattcaacaaaatatatttttaaggtcttgtataacaataaacatcatgatgga
gaaacagagactaaaactgaaacaacatattataattctaaagcactgattatatttttg
gtatttctgattattgtaacatcaattgccctgcttgttgttctctataaaatctatgat
cttcataagaaaaggtccagtgatttaggtgaaataattggtcttgttgacaaggatgaa
aagctgatgactgtggagccaattcattcagatgtcctgttggaaacttacaaaagaaag
atcgctgatgaaggaagactttttctagaagaatttcagagcatcccacgagtgttcatc
aagtatccttgcaaggatgcccggaagcccattaatcagaataaaaaccgctatgttgat
atccttccttatgactataaccgggttgaactctctgacataaatggagatgcagggtca
acctatataaatgccagctatattgatggtttcaaggaaccacggaagtacattgctgca
caaggtcccagggatgaaactgtggatgatttctggaggatgatctgggagcagaaagcc
acagtgattgtcatggtcactagatgtgaagaaggaaataggaataagtgtgcagaatac
tggccatccatggaagagggaacccggaattatggagatgttgttgtcaaggtcctcaat
tgcaagagatgtccagattacatcatacagaagatgaacattacaaataaaaaagaaaaa
acaaatggaagggaggtgacgcacattcagttcaccagctggccggaccatggagtgccc
gatgatcctcacctgctcctcaaactgcgccggcgagttaatgctttcagcaacttcttc
agcggccccatcgtggtacattgcagtgctggtgttggacgcacagggacctatattgga
attgatgccatgctagaaaaactggaggcagagaatgaagtggatgtttatggctatgtt
gttaagctgaggcagcagagatgtctgatggttcaagtggaggcacagtatatcttgatt
catcaggccttggtggagtacaatcagtttggggaaacggaagtgagcttgtctgaattg
cattcatatttgtataacaccaagaaaagagaccctcccagtgatccatctcctctggaa
gctgaatttcagagacttcctacgtataggaactggaggacgcagcacactgggaatcaa
gaagaaaacaaaaataaaaacagaaattcttatgtcattccatatgactttaacagagtg
cctcttaagcatgaactggaaatgagcaaagagagtgaacaggagtcagatgagtcttct
gatgatgacagtgactcagaggaaaccagcaagtacatcaatgcatcttttataatgagc
tattggaaacctgaaatgatgattgctactcagggacctctgaaagacaccattggtgac
ttttgggagatgatattccaaagaaaagtcaaaattattgctatgctgacagatttgaag
aatggagaccaggaatactgtgctcagtactgggtagaaggaaagcaaacatatggagaa
atagaagtcaatatgaaagacacgaacaagtattcagcttacaccatccgtgtctttgaa
cttacacattccaagaagaaagactgccgaactgtgtaccagtaccaatataataagtgg
agtgcagaagaacttcccacagaacccaaagacctaatctctatgatacagaatctcaag
gaaaaacttcccaaaaatagttccaccgaagggactaggagtcacaagaatgtgcctctc
ctcgttcattgcagagatggatctcagcaaacaggagtattttgtgctttgtttaatctt
ttggatagtgcagaaacagaagaggtaatcgatgtctttcaagtagtaaaatctcttcgc
aaagctagaccaggaatgattccttcatttgagcaataccaatttctctatgatgctatg
gctagtctttatcctccacagaatggacaaataaaagaaaacaataataaagaagataaa
attcagtttgataatgaagtggacaaagtaaagcaagatgctaattgtgtcagtccactc
agcaagacagagaaggaccatgaagaaaaaaaggaagatgaagtttccaaacccacaaat
gacactgagggaccagaacattctgccaatggcccagccagtcatacttttacccaaagt
gcatag
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