KEGG   Sorex fumeus (smoky shrew): 130022954
Entry
130022954         CDS       T10594                                 
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum00900  Terpenoid backbone biosynthesis
sfum01100  Metabolic pathways
Module
sfum_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    130022954 (GGPS1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:sfum01006]
    130022954 (GGPS1)
Enzymes [BR:sfum01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     130022954 (GGPS1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     130022954 (GGPS1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     130022954 (GGPS1)
Prenyltransferases [BR:sfum01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   130022954 (GGPS1)
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 130022954
NCBI-ProteinID: XP_055969626
LinkDB
Position
Unknown
AA seq 300 aa
MEKTQETVEKVLLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPHAVKIFTRQLL
ELHKGQGLDIYWRDNYICPTEEEYKTMVLQKTGGLFGLAVGLMQLFSEYKEDLKPLLDTL
GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
IDIKKYCVHYLKDVGSFEYTRNTLKELESKAYKQIDACGGNPELVALVSHLSKMFKEEEE
NT seq 903 nt   +upstreamnt  +downstreamnt
atggagaagactcaagaaacagtcgaaaaagttcttctagagccctacaaatacttactt
cagttaccaggtaaacaagtgagaaccaaactttcacaggcatttaatcattggctaaag
gttcctgaagacaaactacagattatcattgaagtgacggaaatgttgcataacgccagt
ttacttattgatgatattgaagacaactcaaaacttcggcgtggctttccagtggcacat
agcatctatggaattccttctgtcatcaattctgcaaattatgtgtactttcttggcctg
gagaaagtcttaacgcttgatcatccacatgcagtcaaaatttttacacgtcaacttttg
gaacttcataagggacaaggcctagatatttattggagggataattacatttgtcctact
gaagaagaatataaaactatggtgctacaaaagacaggtggactatttggattagcagta
ggtctcatgcagttgttctctgagtacaaagaagatttaaagcctctactcgatacactt
ggcctctttttccaaattagggatgattatgctaatctacactccaaagaatatagtgaa
aacaaaagcttttgtgaagatctaacagagggaaaattctcattccctactattcatgct
atttggtcaagacctgaaagcacccaggtgcagaatattttgcgccagagaactgaaaac
atagatattaaaaaatactgtgtacattatctcaaggatgtaggttcttttgaatatact
cggaatactcttaaagaacttgaatctaaagcctataaacaaatagatgcatgtggtgga
aaccctgagctcgtagctctagtaagccacttaagtaaaatgttcaaagaagaggaagag
taa

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