Sorex fumeus (smoky shrew): 130023116
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Entry
130023116 CDS
T10594
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04064
NF-kappa B signaling pathway
sfum04620
Toll-like receptor signaling pathway
sfum04621
NOD-like receptor signaling pathway
sfum04622
RIG-I-like receptor signaling pathway
sfum04657
IL-17 signaling pathway
sfum04668
TNF signaling pathway
sfum04936
Alcoholic liver disease
sfum05160
Hepatitis C
sfum05161
Hepatitis B
sfum05162
Measles
sfum05164
Influenza A
sfum05165
Human papillomavirus infection
sfum05167
Kaposi sarcoma-associated herpesvirus infection
sfum05168
Herpes simplex virus 1 infection
sfum05169
Epstein-Barr virus infection
sfum05171
Coronavirus disease
sfum05200
Pathways in cancer
sfum05203
Viral carcinogenesis
sfum05222
Small cell lung cancer
sfum05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
130023116 (TRAF3)
04668 TNF signaling pathway
130023116 (TRAF3)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130023116 (TRAF3)
04621 NOD-like receptor signaling pathway
130023116 (TRAF3)
04622 RIG-I-like receptor signaling pathway
130023116 (TRAF3)
04657 IL-17 signaling pathway
130023116 (TRAF3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
130023116 (TRAF3)
05203 Viral carcinogenesis
130023116 (TRAF3)
09162 Cancer: specific types
05222 Small cell lung cancer
130023116 (TRAF3)
09172 Infectious disease: viral
05161 Hepatitis B
130023116 (TRAF3)
05160 Hepatitis C
130023116 (TRAF3)
05171 Coronavirus disease
130023116 (TRAF3)
05164 Influenza A
130023116 (TRAF3)
05162 Measles
130023116 (TRAF3)
05168 Herpes simplex virus 1 infection
130023116 (TRAF3)
05167 Kaposi sarcoma-associated herpesvirus infection
130023116 (TRAF3)
05169 Epstein-Barr virus infection
130023116 (TRAF3)
05165 Human papillomavirus infection
130023116 (TRAF3)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
130023116 (TRAF3)
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
130023116 (TRAF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
CCDC18_1st
CCDC18_2nd
MPS2
Spc29
CCDC39
ODF2_N
zf-C3HC4
ATG16
Cast
NOCA1_mid
zf-C3HC4_2
Rod_CreS
Tropomyosin
GAS
ADIP
DUF3450
T3SSipB
KxDL
DUF1664
LMBR1
V_ATPase_I
SPATA24
Motif
Other DBs
NCBI-GeneID:
130023116
NCBI-ProteinID:
XP_055969660
LinkDB
All DBs
Position
Unknown
AA seq
568 aa
AA seq
DB search
MEASKKVESPGPLQTNAPLKLHPDRGAGAAVLVPELGGYKERFVKAVEDKYKCEKCHLVL
CNPKQTECGHRFCDSCMAVLLSAASPKCTACQEVIVKDKVFRDNCCRREILALQIHCRNE
GRGCAEQLTLGQLLVHLKNDCQFEELACVRADCKEKVLRKDLRDHVGRTCEYREATCTHC
KSQVPRIKLQKHEDTECPCVVVSCPHKCSVQALLRSELSAHLSECVNAPSTCSFKRYGCV
FQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEI
EIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQSWEEADSMKSSVESLQNR
VTELESVDKSAGQAARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIW
KIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRG
EYDALLPWPFKQKVTLMLMDQGSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQ
TVLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgagtaagaaggtggagtccccgggcccgctgcagaccaacgccccgctgaag
ctgcaccccgaccgtggcgccggcgcggcggtgctggtccctgagctcggcggctacaag
gagaggttcgtgaaggccgtggaggacaagtacaagtgcgagaagtgccacctggtgctg
tgcaaccccaagcagaccgagtgcggacaccgcttctgcgacagctgcatggccgtcctg
ctcagcgccgccagcccgaagtgcaccgcctgccaggaagtcatcgtgaaagacaaggtg
ttccgagacaactgctgcaggagggagattctggcccttcagatccactgccgcaacgag
ggccgcggctgcgcagagcagctgacgctgggacagctgctggtgcacttgaagaatgac
tgccagtttgaggagctggcgtgtgtccgcgccgactgcaaagagaaggtcctgaggaaa
gacctgcgggaccacgtgggccgaacctgcgagtaccgcgaggccacgtgcacccactgc
aagagccaggtcccccggatcaagctgcagaagcacgaggacacagagtgcccctgcgtg
gtggtgtcctgcccacacaagtgcagcgtgcaagccctgctgcggagcgagttgagtgcg
cacttgtcagagtgtgtcaatgcccccagcacctgtagttttaagcgctatggctgcgtc
ttccaggggacgaaccagcagatcaaggcccacgaggccagctcggccgtgcagcacgtc
aacctgctcaaggagtggagcaactccctggagaagaaggtctccttgctgcagaacgaa
agtgtagagaaaaacaagagcattcaaagtctgcacaatcagatctgcagctttgagatt
gaaatcgagaggcagaaggagatgcttcgaaataatgagtccaaaattctccatctgcag
cgcgtgatcgacagccaggccgagaagctgaaagagctggacaaggagatccgccccttc
aggcagagctgggaggaggcagacagcatgaagagcagcgtggagtcccttcagaaccga
gtgaccgagctggagagcgtggacaagagcgcagggcaggcggcgaggaacacgggcctg
ctggagtcccagctgagccggcacgaccagatgctgagcgtccacgacatccgcctggcc
gacatggacctgcgcttccaggtgctcgagacggccagctacaacggcgtgctcatctgg
aagattcgggactacaagcggcggaagcaggaagccgtcatgggcaagaccctgtccctg
tacagccagcccttctacaccggctacttcgggtacaagatgtgcgccagggtctacctc
aacggggacgggatgggcaagggcacgcacctgtcgctgttcttcgtcatcatgcgcggc
gagtacgacgccctgctgccctggcccttcaagcagaaagtgacgctcatgctcatggac
cagggctcctcgcggcggcacctgggggacgccttcaagccagaccccaacagcagcagc
ttcaagaagcccacgggggagatgaacatcgcctccggctgccccgtcttcgtggcccaa
actgtgctcgaaaacgggacgtacatcaaagatgacaccattttcatcaaggtcatagtg
gatacttcggatctgcccgacccctga
DBGET
integrated database retrieval system
