Sorex fumeus (smoky shrew): 130023768
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Entry
130023768 CDS
T10594
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum01524
Platinum drug resistance
sfum04115
p53 signaling pathway
sfum04210
Apoptosis
sfum04215
Apoptosis - multiple species
sfum05010
Alzheimer disease
sfum05012
Parkinson disease
sfum05014
Amyotrophic lateral sclerosis
sfum05016
Huntington disease
sfum05020
Prion disease
sfum05022
Pathways of neurodegeneration - multiple diseases
sfum05134
Legionellosis
sfum05152
Tuberculosis
sfum05160
Hepatitis C
sfum05161
Hepatitis B
sfum05162
Measles
sfum05164
Influenza A
sfum05168
Herpes simplex virus 1 infection
sfum05169
Epstein-Barr virus infection
sfum05200
Pathways in cancer
sfum05222
Small cell lung cancer
sfum05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130023768 (APAF1)
04215 Apoptosis - multiple species
130023768 (APAF1)
04115 p53 signaling pathway
130023768 (APAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
130023768 (APAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
130023768 (APAF1)
09172 Infectious disease: viral
05161 Hepatitis B
130023768 (APAF1)
05160 Hepatitis C
130023768 (APAF1)
05164 Influenza A
130023768 (APAF1)
05162 Measles
130023768 (APAF1)
05168 Herpes simplex virus 1 infection
130023768 (APAF1)
05169 Epstein-Barr virus infection
130023768 (APAF1)
09171 Infectious disease: bacterial
05134 Legionellosis
130023768 (APAF1)
05152 Tuberculosis
130023768 (APAF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
130023768 (APAF1)
05012 Parkinson disease
130023768 (APAF1)
05014 Amyotrophic lateral sclerosis
130023768 (APAF1)
05016 Huntington disease
130023768 (APAF1)
05020 Prion disease
130023768 (APAF1)
05022 Pathways of neurodegeneration - multiple diseases
130023768 (APAF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
130023768 (APAF1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
130023768 (APAF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
APAF1_C
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
NB-ARC
WHD_APAF1
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_EML
WDR90_beta-prop_4th
CARD
Beta-prop_WDR41
Beta-prop_NOL10_N
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
CFAP251_N
Beta-prop_TEP1_C
Beta-prop_SCAP
DSE1_N
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_Vps41
ASA1
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
WD40_like
WD40_RFWD3
Beta-prop_HPS5
CARD_2
Beta-prop_ACSF4
Beta-prop_WDR11_2nd
Beta-prop_SPT8
TRM82_WD
PAC11
AAA_16
Beta-prop_Nup120_160
AAA_22
Beta-prop_RSE1_2nd
Utp8_b_propeller
NPHP3_N
ATPase_2
AAA_18
nSTAND6
Motif
Other DBs
NCBI-GeneID:
130023768
NCBI-ProteinID:
XP_055970343
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MDAKARNCLLQHREALEKDIKTSYIMDHMISDGVLTVSEEEKVKNEPTQQHRAAMLIKMI
LKKDNYSYISFYNALLHEGYKDLAALLHGAVPAVSSFNGKDSVGGITSYVRTVLCEGGVP
QRPVVFVTRKKLVTAIRERLFKLNSEPGWVTIYGMAGCGKSVLAAEAVRDHCFLESCFPG
GVHWVSIGKQDKSGLLMKLQNLCTRLDQDESFSQRLPLNIEEAKDRLRVLMLRKYPRSLL
ILDDVWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVVPVESGLGKEKGLEILSLFVN
MKKTELPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQVDFLTEKNRSQLQDLHKKIITQFQRYHQLYTLSPDEEDC
MYWYNFLAYHMASAKMHKELCTLMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDFAV
CENFQEFLSLNGHLLGRQPFPNVIQLGLCEPEISEVYQQAKLRAKQEVDNGMLYLEWINK
KTIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEI
LCCAFSACDRFIATCSVDKTVKIWNSVTGKLIHTYDEHTEQVNCCHFTCSSHHLLLATGS
SDHLLKLWDLNQKECRNTLFGHKNIVNHCRFSPDNKLLASCSADGTLKLWDVKSANESKS
INVKQFFLNSQGPQEDLEVIVKCCSWSADGAKIMVAAKNKIFLFDIHTSSLLAEVHTGHN
STIQYCDFSPQNHLAVVTLSQYCVELWNMESCLKVADCRGHLSWVHCVMFSPDGSSFLTS
SDDQTIRLWETKKVCENSAKVLKQEIDVSFQENEVMVLAVDNIRHLQLINGKTGQIDDLT
EAQVSCCCLSPQLQYIAFGDEDGAIKVLELLNNKIFQSKIGHKNIVRHIQFTVDAKTVIS
SSDDSIIQVWNWQSEEYVFLQAHQETVKDFRLLKNSSLLSWSFDGTVKVWDIITGKIEKD
FICHQDTVLSCDISPDATKFSSTSTDKTAKIWSFDLFSPLHELKGHKGCVRCSVFSVDTT
LLATGDDNGEIRIWNVSSGELLHLCAPISVEGGTATHGGWVTDLRFSPDSRMLVSAGGYL
KWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILQILE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaagctcgaaattgtttgcttcaacatagagaagctcttgaaaaggacatc
aagacatcctacatcatggatcacatgattagtgatggcgttttaacagtatcagaggaa
gaaaaagttaaaaatgagcccactcaacagcatcgagcagctatgctaattaaaatgata
cttaaaaaagataattattcctacatatcattctataatgctctactccatgaaggatat
aaagaccttgccgctcttctccatggtgctgttcctgcggtctcttctttcaatggcaaa
gattcagttggtggaataacttcatatgttagaacagtcctgtgtgaaggtggggtaccg
cagaggccggttgtttttgttaccaggaagaagttggtgactgcaattcgtgagaggctc
ttcaaactgaattctgaaccaggatgggtcactatatatggaatggcaggttgtggaaag
tctgtattagctgcagaagctgttcgagatcattgcttcctagaaagttgtttcccaggg
ggtgtacattgggtttccatcgggaaacaagacaagtctggacttttgatgaaactgcaa
aatctttgcacacggttggatcaggatgagagcttttctcagaggctcccacttaatatt
gaagaggctaaagaccgtctccgcgttctgatgctacgcaaatatccaaggtctctgttg
atcttggatgatgtttgggatccttgggttttaaaagcttttgacaatcagtgtcagatt
cttcttacaaccagagacaagagtgtcacagattccgtaatgggtcctaaatatgtagtt
cctgtggagagtggcttaggaaaagaaaaaggacttgaaattttatctctttttgtaaat
atgaagaaaacagaattgccagaacaagcgcatagtattataaaagaatgtaaaggttct
cctcttgtagtatctttaatcggtgctcttttacgtgactttcccaatcgctgggaatac
tacctcagacaacttcagaacaagcagtttaaaagaataaggaaatcttcatcttatgat
tatgaggctttggacgaagccatgtctataagtgtagaaatgcttagagaagatatcaaa
gattattataccgatctttctattcttcagaaggatgtcaaggtgcctacaaaggtgtta
tgtattctctgggacatggaaactgaagaagttgaagacattctgcaggagtttgttaat
aagtcgcttttattctgtgatcggaatggaaagtcatttcattactatttacatgatctt
caagtagatttccttacagagaagaatcgcagccagttgcaggacctacataagaagata
atcacccaattccagagatatcatcagttatatactctttcaccagatgaggaggactgt
atgtactggtataattttttggcctatcatatggccagtgccaaaatgcacaaagaactt
tgcactttaatgttttctctggattggattaaagccaaaacggaacttgtaggtcctgct
catctgattcatgaatttgtggaatacaggcatatattggatgaaaaggattttgctgtc
tgtgagaatttccaggagtttttatctttaaatggacaccttcttggacgacagccattt
cctaatgttatacagctgggtctctgtgaacctgaaatttcagaggtttatcagcaggct
aagctgcgggccaagcaggaggtcgataatggaatgctctacctggagtggataaacaaa
aaaaccatcaagaatctctctcgcttagttgtccgcccccatacagatgctgtttaccat
gcttgcttttctgaggatggccaaagaatagcttcttgtggagctgataaaaccttacag
gtgttcaaagctgaaacaggagagaagctcttagaaatcaaggctcatgaagacgaaata
ctttgctgtgcattctccgcttgtgataggtttatagcaacttgctctgtggataaaaca
gtaaagatttggaattcagtgactggaaaactaatacatacctatgatgagcacacagaa
caagtcaattgctgtcactttacctgtagtagccatcaccttctcttagccactggatcg
agtgatcacctcctcaaactctgggatttgaatcaaaaagaatgtcgaaataccttgttt
ggccataaaaatattgttaatcactgcagattttcaccagataataaacttttggctagt
tgttcagctgatggaacattaaagctttgggacgtgaaatcagcaaatgagagcaaaagc
attaatgtgaagcagttcttcctgaattcacaagggcctcaagaagacttggaggtgata
gtgaaatgttgttcatggtcagctgacggtgctaaaatcatggtggcagcaaaaaataaa
atctttctttttgacattcataccagcagtttgttggcggaagtccatacaggccataac
agcaccatccagtactgtgacttctcccctcagaatcatttggcggtggtgactttatcg
cagtactgtgtggagttgtggaatatggaatcctgcttaaaagtggctgattgcagagga
catttaagttgggttcattgtgtgatgttttctcctgacggatcatcgtttttgacatct
tctgatgaccaaacaatcaggctttgggagacaaagaaagtatgtgagaactccgctaaa
gtgttaaaacaagaaatagatgtttcgtttcaagaaaatgaagtgatggttcttgcagtt
gataatataagacatcttcaacttattaatggaaaaacaggtcaaattgatgatctcact
gaagctcaagttagttgctgttgcttgagtccacaacttcagtacatcgcatttggagat
gaagatggagccattaaggttttagagctcctaaacaacaaaatcttccaatctaaaatt
gggcacaagaacattgtacggcacatccaattcacagttgatgcaaagaccgtgatttca
agctctgatgattctataattcaggtctggaattggcaatcagaggaatatgtctttctg
caagctcatcaggaaacggtgaaagattttaggctcctgaaaaattcaagtcttctttct
tggtcatttgatggaacagtgaaggtatgggatattattactggaaaaattgaaaaggac
tttatttgtcatcaagatacagtactttcttgtgatatttctccggatgctaccaaattt
tcatctacttctactgacaagactgcaaagatttggagctttgatctgttttcccccctt
catgaactgaagggccacaagggctgtgtgcgctgctccgtcttctctgtggacacgacc
ctgctggcaactggagatgacaatggagaaatccggatatggaatgtctcaagtggtgag
ctgcttcacttgtgtgctccgatatcagtagaaggaggaactgctactcatggaggctgg
gtgactgaccttcgtttttctccagatagcagaatgcttgtctctgctggagggtatctt
aagtggtggaatgttgtcactggtgaatcgtcacagaccttctacacaaatggaaccaat
cttaagaaaatacacgtgtcccctgacttcaaaacctatgtgactgtggataatcttggt
attttatatattttacagattttagagtaa
DBGET
integrated database retrieval system
