KEGG   Sorex fumeus (smoky shrew): 130024820
Entry
130024820         CDS       T10594                                 
Symbol
RAN
Name
(RefSeq) GTP-binding nuclear protein Ran
  KO
K07936  GTP-binding nuclear protein Ran
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03008  Ribosome biogenesis in eukaryotes
sfum03013  Nucleocytoplasmic transport
sfum03250  Viral life cycle - HIV-1
sfum05166  Human T-cell leukemia virus 1 infection
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130024820 (RAN)
   03008 Ribosome biogenesis in eukaryotes
    130024820 (RAN)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    130024820 (RAN)
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    130024820 (RAN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfum03019]
    130024820 (RAN)
   03009 Ribosome biogenesis [BR:sfum03009]
    130024820 (RAN)
   03016 Transfer RNA biogenesis [BR:sfum03016]
    130024820 (RAN)
   03036 Chromosome and associated proteins [BR:sfum03036]
    130024820 (RAN)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfum04147]
    130024820 (RAN)
   04031 GTP-binding proteins [BR:sfum04031]
    130024820 (RAN)
Messenger RNA biogenesis [BR:sfum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     130024820 (RAN)
Ribosome biogenesis [BR:sfum03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    130024820 (RAN)
  Pre-60S particles
    130024820 (RAN)
Transfer RNA biogenesis [BR:sfum03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    130024820 (RAN)
Chromosome and associated proteins [BR:sfum03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     130024820 (RAN)
   Spindle formation proteins
    130024820 (RAN)
Exosome [BR:sfum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130024820 (RAN)
GTP-binding proteins [BR:sfum04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    130024820 (RAN)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RNA_helicase G-alpha Pox_A32 AAA_24 ArgoMid Septin AAA_7 SRPRB TsaE AAA_16 DUF5906 AAA_22
Other DBs
NCBI-GeneID: 130024820
NCBI-ProteinID: XP_055971595
LinkDB
Position
Unknown
AA seq 216 aa
MAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIK
FNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLC
GNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMP
ALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDDL
NT seq 651 nt   +upstreamnt  +downstreamnt
atggccgcccaaggagaaccgcaagtgcagtttaaactggtgctggtgggcgacggcggc
acgggcaagaccaccttcgtgaagcgccacctgacgggcgagttcgagaagaagtatgtc
gccaccctgggcgtcgaggtgcacccgctcgtcttccacaccaaccgcggccccatcaag
ttcaacgtgtgggacacggccggccaggagaagttcggcggcctgcgggacggctactac
atccaagcccagtgtgccattataatgtttgatgtgacatcaagagttacttataagaat
gtgcccaactggcatagagatctagttcgagtatgtgaaaacatccccattgtgttatgt
ggcaacaaagtggatatcaaggacaggaaagtgaaggcaaagtctattgtcttccaccga
aagaagaatctgcagtactatgatatttctgccaaaagtaactacaactttgaaaagccc
ttcctttggcttgctagaaaattaatcggagatccaaacttagagtttgttgccatgcct
gctctcgctccccccgaggtggtcatggacccagccttggcagcacagtacgagcacgat
ttagaggttgctcagacaactgctctcccggatgaggatgatgacctgtga

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