Sorex fumeus (smoky shrew): 130026435
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Entry
130026435 CDS
T10594
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04140
Autophagy - animal
sfum05014
Amyotrophic lateral sclerosis
sfum05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130026435 (C9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
130026435 (C9orf72)
05022 Pathways of neurodegeneration - multiple diseases
130026435 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130026435 (C9orf72)
Membrane trafficking [BR:
sfum04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
130026435 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
130026435
NCBI-ProteinID:
XP_055973212
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MSTLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQTE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIILEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVKTLCLFLTPTERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTIIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQIFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctctgtcccccaccatcgccggccgttgccaagacagagattgctttaagt
ggtgaatctcctttattagcagccacctttgcttactgggataatattcttggtcctagg
gtcaggcacatttgggctccaaagactgaacaggtacttctcagtgatggagaaataacg
tttctggccaatcacactctcaatggagaaatcctccgaaatgcagagagtggggctatc
gatgtaaaattttttgtcttgtctgaaaaaggagtaattattgtttcattaatctttgat
ggcaactggaatggggataggagtacgtatggactgtcaattatacttccacagacggaa
cttagcttctatctcccgcttcacagagtatgtgttgacaggttaacacatattatccgg
aaaggaaggatatggatgcataaggaaaggcaagagaatgtccagaagataattttagaa
ggcacagagagaatggaggatcagggtcagagtattattccaatgcttactggagaagta
attcctgtaatggaattgctttcatctatgaaatcacatagtgttcctgaagaaatagat
atagctgatacagtcctcaatgatgatgatattggtgacagctgtcatgaaggttttctt
ctcaatgccattagctcacacttgcaaacctgtggctgttctgtcgttgtgggtagcagc
gcagagaaagtaaataagatagtgaaaacactatgcctttttctgactccaacagagaga
aaatgttccagattatgtgaagctgaatcatcatttaaatatgagtcgggactttttgta
caaggtctactaaaggactcaactggaagcttcgtcttgcccttccggcaagtcatgtat
gccccctatcccaccacacacatcgacgtggatgtcaacacagtcaagcagatgccgccg
tgtcacgagcacatctacaaccagcgcagatacatgagatccgagctgacagcgttctgg
agagccacatcagaagaagacatggctcaggatacaatcatttataccgacgaaagcttc
acgcctgatttgaatatatttcaagatgttttacacagagacactctagtaaaagccttc
ctggatcagatttttcatctgaagcctggattatctctcaggagtactttcctagcacaa
tttctgcttgtccttcacagaaaagccttgacgctaataaaatacatagaagatgatacg
cagaaggggaaaaagccctttaaatctctgaggaacctgaagatagaccttgatttaaca
gcagagggcgatcttaacataataatggctctagctgagaagattaagcctggactacac
tcatttatctttggaagacctttctatactagtgtacaagaacgagatgttctaatgact
ttttaa
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