Sorex fumeus (smoky shrew): 130026530
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Entry
130026530 CDS
T10594
Symbol
IFNB1
Name
(RefSeq) interferon beta
KO
K05415
interferon beta
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04060
Cytokine-cytokine receptor interaction
sfum04151
PI3K-Akt signaling pathway
sfum04217
Necroptosis
sfum04380
Osteoclast differentiation
sfum04620
Toll-like receptor signaling pathway
sfum04621
NOD-like receptor signaling pathway
sfum04622
RIG-I-like receptor signaling pathway
sfum04623
Cytosolic DNA-sensing pathway
sfum04630
JAK-STAT signaling pathway
sfum04650
Natural killer cell mediated cytotoxicity
sfum04668
TNF signaling pathway
sfum04936
Alcoholic liver disease
sfum05135
Yersinia infection
sfum05142
Chagas disease
sfum05152
Tuberculosis
sfum05160
Hepatitis C
sfum05161
Hepatitis B
sfum05162
Measles
sfum05163
Human cytomegalovirus infection
sfum05164
Influenza A
sfum05165
Human papillomavirus infection
sfum05167
Kaposi sarcoma-associated herpesvirus infection
sfum05168
Herpes simplex virus 1 infection
sfum05169
Epstein-Barr virus infection
sfum05170
Human immunodeficiency virus 1 infection
sfum05171
Coronavirus disease - COVID-19
sfum05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04630 JAK-STAT signaling pathway
130026530 (IFNB1)
04668 TNF signaling pathway
130026530 (IFNB1)
04151 PI3K-Akt signaling pathway
130026530 (IFNB1)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130026530 (IFNB1)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
130026530 (IFNB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130026530 (IFNB1)
04621 NOD-like receptor signaling pathway
130026530 (IFNB1)
04622 RIG-I-like receptor signaling pathway
130026530 (IFNB1)
04623 Cytosolic DNA-sensing pathway
130026530 (IFNB1)
04650 Natural killer cell mediated cytotoxicity
130026530 (IFNB1)
09158 Development and regeneration
04380 Osteoclast differentiation
130026530 (IFNB1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
130026530 (IFNB1)
05161 Hepatitis B
130026530 (IFNB1)
05160 Hepatitis C
130026530 (IFNB1)
05171 Coronavirus disease - COVID-19
130026530 (IFNB1)
05164 Influenza A
130026530 (IFNB1)
05162 Measles
130026530 (IFNB1)
05168 Herpes simplex virus 1 infection
130026530 (IFNB1)
05163 Human cytomegalovirus infection
130026530 (IFNB1)
05167 Kaposi sarcoma-associated herpesvirus infection
130026530 (IFNB1)
05169 Epstein-Barr virus infection
130026530 (IFNB1)
05165 Human papillomavirus infection
130026530 (IFNB1)
09171 Infectious disease: bacterial
05135 Yersinia infection
130026530 (IFNB1)
05152 Tuberculosis
130026530 (IFNB1)
09174 Infectious disease: parasitic
05142 Chagas disease
130026530 (IFNB1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
130026530 (IFNB1)
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
130026530 (IFNB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sfum04052
]
130026530 (IFNB1)
Cytokines and neuropeptides [BR:
sfum04052
]
Cytokines
Interferons
130026530 (IFNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Interferon
RD3
DUF4164
Motif
Other DBs
NCBI-GeneID:
130026530
NCBI-ProteinID:
XP_055973355
LinkDB
All DBs
Position
Unknown
AA seq
190 aa
AA seq
DB search
MANRCIFQIALLLCFSATAFSMSYHLLRSRQRSSNLACQRMLNELNGTLTECLLQRINIT
IPEEIKQPQLLQKEDILLVTYVMLQQIFGIFSRNFSHTFWNESITEKLFLELQQQMDYLE
TTLKERKEEERKKEDVIRCNRTISRLKKYYSRLLKYLKANGYSSCAWVIVKTEIFRNFFF
LNRLTNYLPD
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaggtgtatcttccaaattgctctcctgttgtgcttctccgccacagctttt
tctatgagctatcacttgcttcgatccagacaaagaagcagcaatttggcctgtcagagg
atgctgaatgagttgaatggaacccttacagaatgtctcctgcagaggatcaacatcacc
atcccagaggagatcaaacaacctcagctcctccagaaggaagacatcctactggtcacc
tacgtgatgcttcagcagatctttggaatattcagcagaaatttctctcataccttctgg
aatgagagcatcactgagaaactcttcttagaactccaacagcagatggactatctggag
accaccctgaaggaaagaaaggaagaggaaagaaagaaagaagatgtcatcaggtgtaac
aggactatttcacgtctgaagaaatattactcaaggctcctgaagtacctaaaggccaat
ggatatagtagctgtgcctgggtaatagtcaaaacagaaatcttcaggaactttttcttc
ctgaacagacttacaaattacctcccagactga
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integrated database retrieval system