KEGG   Sorex fumeus (smoky shrew): 130026530
Entry
130026530         CDS       T10594                                 
Symbol
IFNB1
Name
(RefSeq) interferon beta
  KO
K05415  interferon beta
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum04060  Cytokine-cytokine receptor interaction
sfum04151  PI3K-Akt signaling pathway
sfum04217  Necroptosis
sfum04380  Osteoclast differentiation
sfum04620  Toll-like receptor signaling pathway
sfum04621  NOD-like receptor signaling pathway
sfum04622  RIG-I-like receptor signaling pathway
sfum04623  Cytosolic DNA-sensing pathway
sfum04630  JAK-STAT signaling pathway
sfum04650  Natural killer cell mediated cytotoxicity
sfum04668  TNF signaling pathway
sfum04936  Alcoholic liver disease
sfum05135  Yersinia infection
sfum05142  Chagas disease
sfum05152  Tuberculosis
sfum05160  Hepatitis C
sfum05161  Hepatitis B
sfum05162  Measles
sfum05163  Human cytomegalovirus infection
sfum05164  Influenza A
sfum05165  Human papillomavirus infection
sfum05167  Kaposi sarcoma-associated herpesvirus infection
sfum05168  Herpes simplex virus 1 infection
sfum05169  Epstein-Barr virus infection
sfum05170  Human immunodeficiency virus 1 infection
sfum05171  Coronavirus disease - COVID-19
sfum05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    130026530 (IFNB1)
   04668 TNF signaling pathway
    130026530 (IFNB1)
   04151 PI3K-Akt signaling pathway
    130026530 (IFNB1)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    130026530 (IFNB1)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    130026530 (IFNB1)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    130026530 (IFNB1)
   04621 NOD-like receptor signaling pathway
    130026530 (IFNB1)
   04622 RIG-I-like receptor signaling pathway
    130026530 (IFNB1)
   04623 Cytosolic DNA-sensing pathway
    130026530 (IFNB1)
   04650 Natural killer cell mediated cytotoxicity
    130026530 (IFNB1)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    130026530 (IFNB1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    130026530 (IFNB1)
   05161 Hepatitis B
    130026530 (IFNB1)
   05160 Hepatitis C
    130026530 (IFNB1)
   05171 Coronavirus disease - COVID-19
    130026530 (IFNB1)
   05164 Influenza A
    130026530 (IFNB1)
   05162 Measles
    130026530 (IFNB1)
   05168 Herpes simplex virus 1 infection
    130026530 (IFNB1)
   05163 Human cytomegalovirus infection
    130026530 (IFNB1)
   05167 Kaposi sarcoma-associated herpesvirus infection
    130026530 (IFNB1)
   05169 Epstein-Barr virus infection
    130026530 (IFNB1)
   05165 Human papillomavirus infection
    130026530 (IFNB1)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    130026530 (IFNB1)
   05152 Tuberculosis
    130026530 (IFNB1)
  09174 Infectious disease: parasitic
   05142 Chagas disease
    130026530 (IFNB1)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    130026530 (IFNB1)
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    130026530 (IFNB1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:sfum04052]
    130026530 (IFNB1)
Cytokines and neuropeptides [BR:sfum04052]
 Cytokines
  Interferons
   130026530 (IFNB1)
SSDB
Motif
Pfam: Interferon RD3 DUF4164
Other DBs
NCBI-GeneID: 130026530
NCBI-ProteinID: XP_055973355
LinkDB
Position
Unknown
AA seq 190 aa
MANRCIFQIALLLCFSATAFSMSYHLLRSRQRSSNLACQRMLNELNGTLTECLLQRINIT
IPEEIKQPQLLQKEDILLVTYVMLQQIFGIFSRNFSHTFWNESITEKLFLELQQQMDYLE
TTLKERKEEERKKEDVIRCNRTISRLKKYYSRLLKYLKANGYSSCAWVIVKTEIFRNFFF
LNRLTNYLPD
NT seq 573 nt   +upstreamnt  +downstreamnt
atggccaacaggtgtatcttccaaattgctctcctgttgtgcttctccgccacagctttt
tctatgagctatcacttgcttcgatccagacaaagaagcagcaatttggcctgtcagagg
atgctgaatgagttgaatggaacccttacagaatgtctcctgcagaggatcaacatcacc
atcccagaggagatcaaacaacctcagctcctccagaaggaagacatcctactggtcacc
tacgtgatgcttcagcagatctttggaatattcagcagaaatttctctcataccttctgg
aatgagagcatcactgagaaactcttcttagaactccaacagcagatggactatctggag
accaccctgaaggaaagaaaggaagaggaaagaaagaaagaagatgtcatcaggtgtaac
aggactatttcacgtctgaagaaatattactcaaggctcctgaagtacctaaaggccaat
ggatatagtagctgtgcctgggtaatagtcaaaacagaaatcttcaggaactttttcttc
ctgaacagacttacaaattacctcccagactga

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