Sorex fumeus (smoky shrew): 130027086
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Entry
130027086 CDS
T10594
Symbol
RAPGEF3
Name
(RefSeq) rap guanine nucleotide exchange factor 3
KO
K08014
Rap guanine nucleotide exchange factor 3
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04015
Rap1 signaling pathway
sfum04024
cAMP signaling pathway
sfum04072
Phospholipase D signaling pathway
sfum04081
Hormone signaling
sfum04261
Adrenergic signaling in cardiomyocytes
sfum04670
Leukocyte transendothelial migration
sfum04720
Long-term potentiation
sfum04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
130027086 (RAPGEF3)
04072 Phospholipase D signaling pathway
130027086 (RAPGEF3)
04024 cAMP signaling pathway
130027086 (RAPGEF3)
09133 Signaling molecules and interaction
04081 Hormone signaling
130027086 (RAPGEF3)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
130027086 (RAPGEF3)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
130027086 (RAPGEF3)
09156 Nervous system
04726 Serotonergic synapse
130027086 (RAPGEF3)
04720 Long-term potentiation
130027086 (RAPGEF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
130027086
NCBI-ProteinID:
XP_055973723
LinkDB
All DBs
Position
Unknown
AA seq
882 aa
AA seq
DB search
MVLRRMHRPRSCSYQLLLEPQRPSRIQGLRWTPLTDSEESLDFSGSLQQVCPERVLRAGK
QLHRHLLATCPNLIRDRKHHLRLYRQCCSGRELVEGLLALGFGVHSRSQAVGICQVLLDE
GALCHVKHDWTFQDRDTQFYRFRGPEPELVGPRELEEELVEAVALLSQRGPDALLTVALR
KPPGQRTDEELDLIFEELLHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKGTS
WYIIWKGSVNVVTHGKGLVTTLHEGEDFGQLALVNDAPRAATIILREDNCHFLRVDKQDF
DRIIKDVEAKTMRLEEHGKVVLVLEKASQGPASSCPPTPGRTRYTVMSGTPEKILELLLE
AMRPDSNAHDPTETFLSDFLLTHSVFMPSAQLCPALLHHFHAEPAGGSEQERGAYICNKR
QQILRLVSRWAALYGPMLHADAVASGFLQKLSELVSRDARLSHLLQEPLWPDRRRHHRLE
NGCGNASPQVKARNMPVWLPSQDERVPSSNCAIRVGDKVSYDICRRDHSVLSLQLPVTAS
VREVMAALAQRDGWTKGQVLVKVNSAGDAIGLQLDARGVATSLGLNERLFVVDPQDMHEL
TPHPEQLGPTVGSAEGLDLVSAKDLAGQLTEHDWSLFNSIHQVELIHYVLGPQHLRDVTT
ANLERFLRRFNELQYWVATELCLCPVPGPRAQLLRKFIKLAAHLKEQKNLNSFFAVMFGL
SNSAISRLAHTWERLPHKVRKLYSALERLLDPSWNHRVYRLALTKLSPPIIPFMPLLLKD
MTFIHEGNHTLVENLINFEKMRMMARAVRMLHHCRSHGNAPLSPLRSRVSHLHEDNQAAR
ISTCSEQSLGTRSPASTWAYVQQLKVIDNQRELSRLSRELEP
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcggaggatgcatcggcctcgaagctgttcctaccagctgctgcttgagccc
cagcgtcccagtcgcatccaagggcttcgctggactccccttactgacagcgaggagtcc
ctggatttcagcggaagcctgcagcaggtgtgcccggagcgggtgctcagagccgggaag
cagctgcatcggcatctcctggccacctgccccaacctcatccgcgacaggaagcaccac
ctgaggctgtaccggcagtgctgctccggccgggagctggtggaggggctcttggccctt
gggtttggggtccactcccggagccaagctgtgggaatctgccaggtgctgttggatgag
ggtgccctctgccacgtgaaacacgactggaccttccaggaccgagacacccagttctac
cgcttccgggggcccgagccggagctcgtggggcctcgggagctggaggaggagctggtg
gaggcggtggctctgctctcccagcgggggcccgacgccctgctcaccgtggcgctccgg
aagcccccagggcagcgcacggacgaggagctggacctgatcttcgaggagctgctacac
atcaaggctgtggcccacctctccaactcggtaaagcgggaattagctgcagttctgctc
tttgaaccacacagcaaggcagggaccgtgttgttcagccagggcgacaagggcacctcg
tggtacatcatctggaagggatctgtcaatgtggtcacccacggcaaggggctggtgacc
acgctgcacgagggggaggacttcggacagctggcactggtgaacgacgcgccccgggca
gccaccatcatcctgcgggaagacaactgtcactttctgcgcgtggacaagcaggacttc
gaccgcatcatcaaggacgtggaagccaagaccatgaggctggaggagcacggcaaggtg
gtgctggtgctggagaaggcgtctcagggccccgcgtcttcttgccccccaactccaggc
aggacccggtacacggtgatgtccggcaccccggagaagatcctggaactgctgttggag
gccatgaggcccgattccaacgctcatgacccaacagagacgttcctcagcgacttcctc
ctgacccacagcgtcttcatgcccagcgcccagctctgccctgccctcctgcaccatttc
cacgcggagccggcgggcggcagcgagcaggagcgcggcgcctacatctgcaacaagagg
cagcagatcctgcggctggtcagccgctgggcagcgctgtacggccccatgctgcacgcg
gacgccgtggccagcggcttcctgcagaaactctcggagctggtgagcagggacgcccgg
ctcagccacctgctgcaggagccgctgtggccggaccggcgccgccaccacaggttggag
aatggttgtgggaacgcatctcctcaagtgaaggcccggaacatgcccgtttggcttccc
agccaggacgagcgggtccccagcagtaactgtgccatccgagttggggacaaagtctct
tatgacatctgccggcgggaccactcggtgctgagcctgcagctgccggtaacggcctct
gtgagggaggtgatggctgccctggcccagcgggacggctggaccaaggggcaggtgctg
gtgaaggtcaactcggcaggggatgccattggcctgcagttggacgcccgcggtgtggcc
acctccctgggtctcaacgagcggctcttcgttgtcgatccccaggacatgcatgaactg
accccacaccccgagcagctggggcccaccgtgggctcggccgaagggctggacctggtg
agcgccaaggacctggcgggtcagctgacagaacacgactggagcctcttcaacagcatc
caccaggtggagctgatccactatgtgctgggcccccagcacctgcgggacgtcaccacg
gccaacctggagcgcttcctgcgccgcttcaacgagctgcagtactgggtggccacggaa
ctgtgtctctgcccggtgcccggccccagggcccagctgctcaggaagttcatcaaactg
gcggcgcatctcaaggagcagaaaaatctcaactccttctttgctgtcatgttcggtctc
agcaactctgccatcagccgcctggcccacacctgggagcggctgccccacaaagtccgg
aagctctactcggcccttgagaggctgctggacccttcgtggaaccaccgggtgtatcgg
ctggcgctcaccaagctctcgccccccatcatccccttcatgcccctccttctcaaagac
atgaccttcatccacgaggggaaccacaccctggtggagaatctcatcaactttgagaag
atgagaatgatggccagggccgtgcggatgctgcaccactgtcggagccacggcaacgcg
cccctctcgccgctcagaagccgcgtctcccacctgcacgaggacaaccaggcggcgagg
atctccacatgctcggagcaatccctgggcaccaggagtccggccagcacctgggcgtat
gtccagcagctgaaggtcatcgacaaccagcgggaactgtcccgcctctcccgggagctg
gaaccttga
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