Sorex fumeus (smoky shrew): 130027413
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Entry
130027413 CDS
T10594
Symbol
PTCD3
Name
(RefSeq) small ribosomal subunit protein mS39
KO
K17659
pentatricopeptide repeat domain-containing protein 3
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sfum03029
]
130027413 (PTCD3)
Mitochondrial biogenesis [BR:
sfum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
130027413 (PTCD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rib_mS39_PPR
PPR_2
PPR_3
PPR_long
TPR_24
PPR
RPM2
Marek_SORF3
Motif
Other DBs
NCBI-GeneID:
130027413
NCBI-ProteinID:
XP_055974151
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MAAAASGFCLRAPSRLRLPLTVRHVGVCGRALSCRPYSGSIAVSKVEGTDTTGVEEVVIP
KKKTWDKVAVLQALASTVNRDATAVPYAFQDDPYLIPTSSLESHSFLLAKKSGENAAKFI
INSHPKYFQKDIAEPHIPCLMPECFEPQIEDVSEAALQERIKLRRVKASVNMFDQLLQAG
TPVSLETTNSLLDLLCYYGDQEPSAYHHFQQQSEELEETTEEDSEKPKKRPVHQLYKLTW
RAKNNAERIFALMPEKNAHSYCTMIRGMVKHRAYTQALDLYTELLNNRLHADVYTFNALI
EATTWLTNEKFEGKWNSVLELLKQMAAQNVKPNLQTFNTILKCLRRFYAFGKLPALQTFR
EMKAIGIEPSLATYHYLIQLFYQHESPSKGASLIIYEIIKEMTGKKFSPMDVDDDMFFQS
AMKACSSLKDLELAYQIHDLLNTGENWKFIGSDNRRNFYYSKFFSLICLMEQIDVTLKWY
KDLIPSVFFPHSQAIIDLLQALDVANRLEVIPQIWKDCKEYGHTYRNDLREEILTLMARD
HHVPELQVAFADCGADIKATYESQDAKQTPDWPANPLNCIVVLLLRAGRAQEAWKMLGLF
RKHNKIPRNDMLKELMDSAKASNSPAQAIEVVKLAQAFSLPVCESLTQRVMTDFKLSQEQ
KEALGNLSALSSDSESDSDSDIGGSK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgcagcttcggggttctgtttgcgggcccccagcaggctgcgcctgcccttg
actgttcggcacgtaggtgtatgtggacgggcgctcagctgcaggccttattctggaagt
attgctgtttcaaaggttgaaggaactgatacaactggggttgaagaagtggtcattccg
aaaaagaaaacatgggataaagtggctgttcttcaagctcttgcatccacagtaaacagg
gatgccacagcagtcccttacgcctttcaggatgatccttatctcataccaacatcttcc
ttggaatctcattcatttttattggcaaagaagtctggagagaatgcagcgaagtttatt
attaattcacatcctaaatatttccagaaggacatagctgaacctcatataccgtgttta
atgcccgagtgctttgaacctcagattgaagatgtaagtgaggccgccctgcaggaacgt
atcaagctcagaagagtgaaagcttctgtaaacatgtttgatcagctcttacaagcagga
actcctgtgtctctggaaacaactaatagtctcttggatttattgtgttactatggtgac
caagaaccctctgcttaccaccattttcagcaacaatcagaagagttggaagagaccaca
gaggaagatagtgagaagccaaagaagaggcctgttcatcagttatacaaattgacttgg
agggcgaaaaacaatgctgaaagaatctttgctctaatgccagagaaaaatgcacattcc
tattgcaccatgatccgaggaatggtgaagcaccgagcttatacacaggcattagactta
tacaccgaattattaaacaacagactccatgccgatgtttacactttcaatgcattgatc
gaagcaacaacgtggttgacaaatgaaaaatttgaaggaaagtggaatagtgtactggag
ctgctgaaacaaatggctgcacagaatgtgaaaccaaatctacagacttttaataccatt
ctgaagtgtctccgaagattttatgcatttggaaaattgccagccttacagacctttcgg
gagatgaaagccatcgggatagaaccctcgcttgcaacgtatcactaccttattcagctg
ttttatcaacatgaaagtccttcgaaaggtgcatccctcataatctatgaaatcataaaa
gaaatgacagggaagaaattttccccaatggatgtggatgacgatatgttttttcagtca
gccatgaaagcttgctcatctctgaaagatctggagcttgcttatcaaatacatgacctt
ttaaacactggagaaaattggaaattcattggatctgacaatcgacgtaatttctactat
tctaaatttttcagtttgatttgtctcatggaacaaatcgatgtcaccttgaagtggtat
aaggacctgataccttcagtcttctttcctcattcccaagcaataatagatctgcttcaa
gcactggacgtggctaatcggctagaagtgattcctcaaatatggaaagattgtaaagaa
tatggtcacacctatcgcaatgacctgagagaggagattttgacactcatggcaagggat
catcatgtgccagagcttcaggtggcattcgctgactgtggtgctgacatcaaagctaca
tacgagagccaagatgccaaacagactcctgattggcccgccaaccctctcaactgtata
gttgtcctcctcctaagggctgggagagcccaggaagcctggaagatgttggggcttttt
aggaagcataataagattcctagaaacgacatgctgaaagaactcatggatagtgccaaa
gcttccaacagtcctgcgcaggccattgaggttgtgaagctggcccaggccttcagctta
cctgtctgtgagagcctcacgcaaagagtgatgactgacttcaaactcagccaggagcaa
aaggaagctctgggaaacctaagtgcactgagcagtgacagcgagagtgacagtgacagc
gacattggtggaagcaagtaa
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