Sorex fumeus (smoky shrew): 130027729
Help
Entry
130027729 CDS
T10594
Symbol
CACNA2D1
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04010
MAPK signaling pathway
sfum04260
Cardiac muscle contraction
sfum04261
Adrenergic signaling in cardiomyocytes
sfum04921
Oxytocin signaling pathway
sfum05410
Hypertrophic cardiomyopathy
sfum05412
Arrhythmogenic right ventricular cardiomyopathy
sfum05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130027729 (CACNA2D1)
09150 Organismal Systems
09152 Endocrine system
04921 Oxytocin signaling pathway
130027729 (CACNA2D1)
09153 Circulatory system
04260 Cardiac muscle contraction
130027729 (CACNA2D1)
04261 Adrenergic signaling in cardiomyocytes
130027729 (CACNA2D1)
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
130027729 (CACNA2D1)
05412 Arrhythmogenic right ventricular cardiomyopathy
130027729 (CACNA2D1)
05414 Dilated cardiomyopathy
130027729 (CACNA2D1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfum04040
]
130027729 (CACNA2D1)
Ion channels [BR:
sfum04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130027729 (CACNA2D1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
IFN-gamma
Motif
Other DBs
NCBI-GeneID:
130027729
NCBI-ProteinID:
XP_055974553
LinkDB
All DBs
Position
Unknown
AA seq
1082 aa
AA seq
DB search
MAAGCLLAWTLTLFQFLLLGPSSEEPFPSAVTIKSWVDKMQEDLVTLAKTASGVGQLADI
YEKYQDMYTVEPNNARQLVEKAATNIEQLLKSRSTALVRLAQEAEKVQAAHQWREDFASN
EVVYYNAKDDLDSEKNESEPGSQRIKPVFFEDANFGRQISYQHAAVHIPTDIYEGSTIVL
NELNWTSALDEVFKRNQREDPTLLWQVFGSATGLARYYPASPWVDNSRTPNKIDLYDVRR
RPWYIQGAASPKDMLILVDVSGSVSGLTLKLIRTSVSEMLETLSDDDFVNVASFNSNAQD
VSCFQHLVQANVRNKKVLKDAVNNITAKGITDYKKGFSFAFEQLLNYNVSRANCNKIIML
FTDGGEERAQEIFAKYNKDKKVRVFTFSVGQHNYDRGPIQWMACENKGYYYEIPSIGAIR
INTQEYLDVLGRPMVLAGEKAKQVQWTNVYLDALELGLVITGTLPVFNITGQVENKTKNQ
LILGVMGIDVSLDDIKRLTPRFTLCPNGYYFAIDPNGYVLLHPNLQPKNPKSQEPVTLDF
LDAELENDIKVEIRNKMIDGESGDKTFRTLVKSQDERYIDKGNRTYTWTPVNGTDYSLAL
VLPTYSFYYIKAKIEDTITQARYSETLKPDNFEESGYTFIAPRDYCNDLKISDNNTEFLL
NFNEFIDRKTPNDPSCNTDLINRVLLDAGFTNELVQNYWSKQKNIKGVKARFVVTDGGIT
RVYPKEAGENWQENPETYEDSFYKRSLDNDNYVFTAPNFNKTGPSAYESGIMVSKAVEIN
IQGKLLKPAVVGIKIDINSWIENFTKTSIRDPCAGPVCDCKRNSDVMDCVILDDGGFLLM
ANHDEYTNQIGRFFGEIDPSLMRHLINISVYAFNKSYDYQSVCEPGAAPKQGAGHRSAYV
PSIADILHIGWWATAAAWSILQQFLLSLSFPRLLEAADMEEEDFTASLSKQSCITEQTQY
FFDNDSKSFSGVLDCGNCSRIFHVEKLMNTNLVFIMVESKGTCPCDTRLLIQAEQTSDGP
DPCDMVKQPRYRKGPDVCFDNNVLEDYTDCGGVSGLNPSLWSIIGIQFLLLWLLSGSRHY
QL
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggctgcctgctggcctggactctgacacttttccaatttttgctgctcggt
ccctcgtcggaggagccgttcccttcggctgtcacaataaagtcatgggtggataagatg
caagaggaccttgtcactttggcaaaaacagcaagtggagtcggtcaacttgctgatatt
tatgagaaatatcaagatatgtatacagtggagccaaataatgcacgccagctggtggaa
aaggcagccacaaatattgagcaacttctgaaaagtagatctacagctctggtgcgtctg
gcccaggaagcagaaaaagttcaagcagcccaccagtggagagaggattttgcaagcaat
gaagttgtctactacaacgcaaaggatgatcttgattctgaaaagaatgaaagtgaacca
ggaagccagaggataaagcctgttttcttcgaagatgcgaactttggtcggcaaatatcc
tatcagcatgctgcagtccatattcccactgacatctatgagggctcgacaatcgtgtta
aatgaactgaactggacaagtgccttagatgaagtcttcaaaagaaatcaacgggaggat
cccacattgctgtggcaagtgttcggcagtgccacgggcctcgcccgatattatccagct
tctccatgggttgataacagcagaactccaaacaagattgatctttatgatgttcgcaga
agaccatggtacatccaaggagctgcatctcctaaggacatgctcattctggttgatgta
agtgggagtgttagtggattgacccttaaattgatccgcacatctgtctctgaaatgttg
gaaacactctcagatgatgattttgtgaatgtagcttcatttaacagcaatgcccaggat
gtaagctgttttcagcatcttgtccaagcaaatgtaagaaataagaaagtgctgaaagat
gcagtgaataatatcacagcaaagggaatcacagactataagaagggttttagttttgct
tttgaacagctgctcaattacaatgtttccagagccaactgcaataagattatcatgttg
ttcacggatggaggagaggagagagcccaggagatatttgccaaatataataaagacaaa
aaagtacgggtatttacattttcagttggtcaacataattatgacagagggcctattcag
tggatggcatgtgaaaataaaggttattattatgaaattccttccattggagcaataaga
atcaatactcaggaatatttggatgttctgggaagaccaatggttttagcaggagaaaaa
gctaagcaagtacaatggacaaatgtatatttggatgcattggaattgggacttgtcatt
actggaactcttcctgtcttcaatattactggccaagttgaaaataagacaaagaaccag
ctaatacttggtgtgatgggaattgatgtgtcattggacgatattaaaagactgacacca
cgttttacactgtgccccaatggctattattttgcaatagatcctaatggttatgtttta
ttacatccaaatcttcagccaaagaatcctaaatctcaggagccagtaacattggatttc
cttgatgcagaattagagaatgatattaaggtggagattcgtaataaaatgatagatggg
gaaagtggagataaaacattcagaactctggttaaatctcaagatgagagatacattgac
aaaggaaacaggacatacacatggactccagttaatggcacagattacagtttggccttg
gtattaccaacctacagtttttactatataaaagccaaaatagaagacacaataactcag
gccagatattcagaaacactgaaaccagataattttgaagagtctggctatacctttata
gcaccaagagattactgcaatgaccttaaaatatcagataataacactgagtttctttta
aatttcaatgagtttattgatagaaaaactccaaacgacccatcatgcaacacagatttg
attaatcgagtcttgctggatgcaggctttacaaatgaacttgttcaaaattactggagt
aaacagaaaaacatcaagggagtaaaagcacgttttgttgtgactgatggtggaattacc
agagtttatccaaaggaggctggagaaaattggcaagaaaacccagagacatatgaggac
agcttctataaaaggagtctagataatgataattatgttttcactgctcctaactttaac
aaaactggacctagtgcttatgaatctggcattatggttagcaaagctgtagaaataaat
atccaaggaaaacttcttaaacctgcagttgttggaattaaaattgatataaactcctgg
atcgagaatttcaccaaaacatcaatccgggacccgtgtgctggtccagtttgtgactgc
aaaagaaacagtgatgtaatggattgtgtgattttagatgatggtggatttcttttgatg
gcaaatcatgatgaatacactaaccagattggaagattttttggagagattgatccaagc
ttgatgagacacttgattaatatatcagtttatgcttttaacaaatcctatgactatcag
tcagtgtgtgagcctggagctgcgccgaagcaaggagcagggcatcgctcagcatatgtg
ccatcaatagcagacatactgcacattggctggtgggccactgctgctgcctggtctatt
ctacagcagtttcttttgagtttgagctttccacgactcctcgaagcagctgacatggaa
gaggaggattttacagcctctctgtcgaaacagagctgtattactgaacaaacccaatat
ttctttgacaatgatagtaaatcattcagcggtgtacttgactgtggaaactgttccaga
atctttcatgtagaaaaacttatgaacacgaacttagttttcataatggtggaaagcaaa
gggacttgtccctgtgacactcggcttctcatacaagcagagcagacttctgatggtcca
gatccttgtgacatggttaagcagcccagatatcgaaaagggcctgatgtctgctttgat
aacaatgttctggaggattacactgactgtggtggtgtttctggattaaatccctccctg
tggtctatcattggaatacaatttttactactttggcttttatctggcagtagacactac
cagttatga
DBGET
integrated database retrieval system
