Sorex fumeus (smoky shrew): 130032003
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Entry
130032003 CDS
T10594
Symbol
BABAM2
Name
(RefSeq) BRISC and BRCA1-A complex member 2
KO
K12173
BRCA1-A complex subunit BRE
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130032003 (BABAM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130032003 (BABAM2)
03036 Chromosome and associated proteins [BR:
sfum03036
]
130032003 (BABAM2)
03400 DNA repair and recombination proteins [BR:
sfum03400
]
130032003 (BABAM2)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
130032003 (BABAM2)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
130032003 (BABAM2)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
130032003 (BABAM2)
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
130032003 (BABAM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE
UL17
Motif
Other DBs
NCBI-GeneID:
130032003
NCBI-ProteinID:
XP_055979561
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MSPEVALTRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPSCDRFKLHI
PYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALHNLASWNPSNPECLLLVVKEL
VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD
FSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAF
PGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYVAAFLSHFGTGVVEYDAEGFTKLTLL
LMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK
RAKAYFRTFVPQFQEAAFANGKL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtccccagaagtggccttgacccggatttccccgatgctctccccattcatatccagt
gtggtccgtaatggaaaagtgggactggatgccaccaactgcttgaggataaccgacttg
aaatctgggtgcacgtcattgactcccggacccagctgcgaccggtttaagctgcacatc
ccgtatgcaggggagaccctgaaatgggatatcattttcaatgcccagtacccggagctg
cccccggatttcatctttggggaagacgctgagttccttccagatccttcagctttgcat
aacctcgcttcctggaacccttcgaatcccgaatgcctcttgctggtggtgaaggagctg
gtccaacagtaccaccagttccagtgcagccgcctccgcgagagctcccgcctcatgttc
gagtaccagacgctgctggaagaacctcagtacggagagaacatggaaatctacgccggg
aagaagaacaactggactggtgaattttcagctcgcttccttttgaagttgcctgtggat
ttcagcaacattcccacataccttctcaaggatgtgaatgaagaccctggagaagatgtg
gccctcctttctgtcagttttgaggacactgaagccactcaggtgtaccccaagctgtac
ttgtctccccgaattgagcatgccctcggaggctcctcggcccttcacatccctgccttc
ccaggaggaggctgcctcatcgactacgtgcctcaagtgtgtcacctgctcaccaacaag
gtacagtacgtgatccagggctaccacaagagaagagagtatgtcgccgctttcctcagc
cactttggcacaggcgtcgtggagtacgatgcggaaggcttcacgaaactcactctgctg
ctgatgtggaaagacttctgctttctcgtacacatcgacctgcccctgtttttccctcga
gaccagccgactctcacattccagtctgtctaccacttcaccaacagtggacagctttac
tcccaggcccagaagaattacccctacagcccccgatgggatggaaacgaaatggccaag
agagcaaaggcttacttcaggacctttgtcccccagttccaggaggccgccttcgccaac
gggaagctctag
DBGET
integrated database retrieval system
