Sorex fumeus (smoky shrew): 130033465
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Entry
130033465 CDS
T10594
Symbol
LTBP1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130033465 (LTBP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfum04990
]
130033465 (LTBP1)
Domain-containing proteins not elsewhere classified [BR:
sfum04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
130033465 (LTBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
EGF_MSP1_1
EGF_TEN
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
130033465
NCBI-ProteinID:
XP_055981186
LinkDB
All DBs
Position
Unknown
AA seq
1391 aa
AA seq
DB search
MDPQLTRLLLFLSLPPLLVGNHTGRIKVVFTPSICKITCTKGSCQNSCEKGNTTTLISEN
GHAADTLTATNFRVVICHLPCMNGGQCTSRDKCQCSPDFTGKLCQIPVHGARVPKRYPHA
QPASKALGTHVVHSTHTLPLTMTSQQGVKVKFPPNIVNIHVKHPPEASVQFHQVSRIDGS
TGQKVKDPAQPSQAQVSYPGLPVQKTQAVHSTYSHQQVVPRVYPVAAKTQLGRCFQETVG
AQCGKALPGLSKQEDCCGTVGTSWGFHKCQKCPKKPAYHGSNQILECLQGFKRVNNTFCQ
DINECQLQGLCPNGECLNTMGSYRCTCKMGFGPDPTFSSCVPEPPVISEEKGPCYRLVSS
GRQCLHPLSVHLTKQLCCCSVGKAWGPHCEKCPPPGTAAFKEICPGGMGYTVSGVHRRRP
IHHHVGKGLVFVKPKNTHPVAKSTHPPPLPAKEEHVEALSFPQEHGHGRAEQEVATIPSE
KEIASLDHGKNKLEPGQPQLSPGVSTIHLQPQFPVVIEKTSPPVPVEVAPEGSTSSASQV
IAPTQVTEINECTVNPNICGAGHCVNLPVRYTCICYKGYAFSDQLRKCVDIDECAQVPNL
CSHGRCENTEGSFLCICPAGFMANEEGTHCIDVDECRRPQVCGTGHCVNTVGAFRCEHCD
SGYRMTRGGRCEDVDECVVPSACPEEQCVNTPGSYRCVPCTEGFRGWSGQCLDVDECLDP
RVCRNGTCTNLDGSYMCSCHRGYSPTPDRKHCKDIDECQQGTLCLHGQCRNTEGSFQCTC
SQGYQLSAAKDQCEDIDECQHHHLCSNGQCRNTEGSFRCVCNHGYRASGLGDRCEDINEC
LEDKNVCQGGDCINTEGSYECTCPEGFQLNGHKGCRDVNECEQTGLCGPHGECLNTEGSF
HCICEQGFSISSDGRVCEDIDECVNNTICDRHGFCDNTAGSFRCLCYQGFQAPPDGQGCV
DVNECELLSGVCGEAACENVEGSFLCVCPHEHQEYSPMTGQCRPPVPEGVDPPREEKKEC
YYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNCEIFPCPVVGTAEFSEMCPRGKGFVP
SGDSVYDIGGESYKDANECLLFGQEICKNGFCLNTQPGYECYCKQGTYYDPVQLQCFDMD
ECQDPSSCVDGQCVNTEGSYNCFCTLPLVLDASEKRCVRPAESQEQVEDTDVYQDLCWEH
LSEEFVCSQPLVGRQTTYTECCCLYGEAWGMQCALCPMKDSDDYAQLCNLPRAGRRRPYG
HDALVDLSQQYVPETDPYFLQDRFDSFEELQAEECGILNGCENGRCVRVPEGYTCDCFDG
FHLDMAKMTCVDVNECEELNSRMTLCKNAQCINTEGSYRCLCLPGFVPSDRPNYCTAASS
ASSRERDSDLE
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggatccccagctgactcgcctcttgctctttctctccctgccgcccttgctagtgggc
aaccacacgggccgcatcaaggtggtcttcacgcccagcatctgcaagatcacctgcacc
aagggcagctgccagaacagctgcgagaaaggcaacaccaccacgctcatcagcgagaac
gggcacgcggccgacacgctgaccgccaccaacttccgagtggtcatctgtcacctcccc
tgcatgaatggcggccagtgtacttccagggacaagtgccagtgctctcccgacttcacg
ggcaagctctgccagatcccagtgcacggcgcccgcgtgcccaagcggtacccgcacgcc
cagccagccagcaaggcgctgggcacgcacgtcgtccactccacgcacactttgcctctt
accatgaccagccagcaaggagtcaaagtgaaatttcctcccaacatagtcaacatccac
gtgaagcaccctcccgaggcgtccgtgcagttccatcaggtgtcgcggatcgacggctcc
acgggccagaaggtgaaagaccctgcccagcccagccaggcccaggtctcctacccgggg
ttgccagtgcagaagactcaggcggtgcattccacgtactcccaccagcaggtggttccc
cgcgtctaccccgtggccgccaagacgcagctgggccgctgcttccaggaaaccgtgggt
gcccagtgtggcaaggcgctgccggggctgtccaagcaggaggactgctgcggcaccgtg
ggcacctcctggggcttccacaagtgccagaagtgccccaagaagcccgcttaccacgga
tcgaaccaaatcctggagtgtttgcagggtttcaagcgcgtgaacaacaccttctgtcaa
gatatcaatgagtgccagctccaggggctgtgccccaatggtgagtgtttgaataccatg
gggagctatagatgtacctgcaaaatgggctttgggccggatccgaccttttcgagttgc
gttccggaaccccctgtgatctcggaggagaaggggccttgctaccgactggtcagttcc
gggaggcagtgcctgcaccctctgtctgtgcacctcaccaagcagctctgctgttgtagc
gtgggcaaggcctggggcccccactgtgagaaatgccccccgccaggcacagccgctttt
aaggaaatctgtcctggtggaatgggttatacggtttctggcgtacacagacgcaggcca
atccatcaccatgtaggtaaaggacttgtatttgtcaagccaaagaacacccatcctgtt
gctaaaagtactcaccctccacctctcccagccaaggaagagcacgtggaggccctcagc
ttcccccaggagcacgggcacggccgggcagagcaggaagtggcaactataccctctgag
aaggaaattgcttccttggatcacgggaaaaacaaacttgagcctggtcaaccccagctc
tctccaggcgtttccacaattcatctgcagccccagtttccagtcgtgattgagaaaaca
tcccctcccgtgcctgtggaggtcgctcctgaaggttccacgtcaagtgccagccaagtg
attgcccctactcaggtgacagaaatcaacgaatgtactgtgaaccccaatatctgtgga
gctggacactgcgtcaaccttccagtgaggtatacctgcatttgctacaagggctatgcg
ttcagtgaccagctgagaaagtgtgtagacatcgacgagtgtgcacaggtgccaaacctc
tgctcccatggccgctgtgagaacactgagggcagcttcctgtgcatctgcccggcgggc
ttcatggccaacgaggagggcacccactgcatcgacgtggacgagtgtcgacggccgcag
gtgtgcgggacaggccactgtgtcaacacggtgggcgccttccgctgtgagcactgcgac
agtggctaccgcatgacccggggaggccgctgtgaagacgtggacgagtgtgtagtcccc
agcgcctgtcccgaggagcagtgcgtgaacacgccgggctcctaccgctgcgtgccctgc
actgagggattccgaggctggagcggccagtgtctggatgtggatgagtgcctggatccc
agagtctgccgcaacgggacgtgcaccaacctggacggctcctacatgtgttcctgccac
cggggctactccccgacgcctgaccgcaagcactgtaaagatattgatgagtgccagcaa
gggactctctgcctgcacgggcagtgcagaaacaccgagggctccttccagtgcacttgt
agccaggggtaccagctgtcagcagcaaaagaccagtgtgaagacatcgacgaatgccaa
caccaccatctctgcagcaacgggcagtgcaggaacacagaaggctccttccgctgtgtc
tgcaaccacggctacagagcctccggcctgggtgaccgctgtgaagatatcaacgaatgc
ttggaagataagaatgtttgccaaggaggagactgcattaataccgagggctcgtatgag
tgcacctgtccggaagggttccaactcaatggccacaaaggatgtcgagatgttaatgaa
tgtgagcaaactgggctgtgtggtcctcacggggagtgtctgaacaccgagggttctttt
cactgcatctgcgagcaaggcttctccatttcctcagatggtcgcgtgtgcgaagatatt
gatgaatgtgtaaacaacactatttgtgacaggcacggcttttgtgacaatacagccggc
tccttccgctgcctctgttaccaaggctttcaggcccctccggatgggcaggggtgtgtg
gacgtgaacgagtgtgagctgctgagcggcgtgtgtggcgaggcggcctgcgagaacgtg
gagggctccttcctgtgcgtgtgtccccacgaacatcaggagtacagccccatgaccggc
cagtgccgcccgcccgtgccggaaggcgtggacccgcccagggaggagaagaaagaatgt
tactacaacctgaacgacgccagcctctgcgacaacgtgctggcgcccaacgtcaccaag
caggagtgttgctgcacctcgggcgccgggtggggtgacaactgcgagatcttcccctgc
ccggtggtggggacggcggaattctcggagatgtgtcccagagggaaaggcttcgtccct
tccggagactccgtgtacgacatcggcggtgagagctacaaagacgcaaatgaatgcctc
ctctttggacaggagatctgtaagaacggcttctgcctgaacacgcagccgggctacgag
tgttactgcaagcagggcacctactatgaccccgtgcagctgcagtgctttgacatggac
gagtgtcaggaccccagcagctgcgtggacggccagtgcgtcaacacggaaggctcctac
aactgcttctgcaccctccctctggttctggatgcttccgagaagagatgcgtgaggccg
gctgagtcccaagagcaagtggaagacaccgacgtctaccaggacctgtgctgggagcac
ctgagcgaggagttcgtgtgcagccagcccctggtgggccggcagaccacctacaccgag
tgctgctgcctctacggggaggcctggggcatgcagtgcgccctgtgccccatgaaggac
tcagatgactacgcccaactctgcaacctcccccgggccggccggcggcgcccctacggc
cacgacgccctggtggacctgagccagcagtatgtgccggagaccgacccctacttcctc
caggaccgcttcgacagcttcgaggagctgcaggccgaggagtgcggcatcctgaacggc
tgcgagaacgggcgctgcgtgcgggtgcccgagggctacacctgcgactgcttcgacggc
ttccacctggacatggccaagatgacgtgtgtggatgtcaacgagtgtgaggaactcaac
agccgcatgaccctctgcaagaacgcccagtgcatcaacaccgagggctcctaccgctgc
ctgtgcctgccgggcttcgtgccctccgacaggcccaactactgcaccgcggcgagctca
gcctccagccgggagcgggacagcgacctggagtaa
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