Sorex fumeus (smoky shrew): 130034223
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Entry
130034223 CDS
T10594
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04360
Axon guidance
sfum04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
130034223 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
130034223 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfum01009
]
130034223 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfum04040
]
130034223 (TRPC5)
Protein phosphatases and associated proteins [BR:
sfum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130034223 (TRPC5)
Ion channels [BR:
sfum04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130034223 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
LEH
ATP-synt_DE
Motif
Other DBs
NCBI-GeneID:
130034223
NCBI-ProteinID:
XP_055981767
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAAEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGERQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKTE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGLLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETKAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFIYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSFIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHPRRSFSTSSAELSQ
RDDTNDGTGGARAKSKSVSFNVGCKKKAYHGPPLIRTMPRTSGTQGKSKAESSSKRSFMG
PSLKKLGFLFNRFNNGHSSEPSSEPMYTISDGIVQQHYMWQDIRYSQMEKGKAEACSQSE
INLSAAELGEARGTAQTSECPLACSSSLQCISSICSSNSKLLDSSEDVFETWGEACDLLM
HKWGDGQEEQVTTRL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactatactacaaaaaggtaaactactcaccatatagagaccggattcccttg
caaattgtgagggccgagacggaactatctgcagcagagaaggcctttctcaatgcagta
gagaaaggagactatgccaccgtgaagcaagccctacaggaggctgaaatttactacaat
gtcaatatcaactgcatggatcctttgggccggagtgccctcctcattgccattgagaat
gaaaacttggagatcatggaactattgctaaaccacagtgtttatgtaggtgacgcattg
ctctatgccatccgtaaagaagtggtgggtgctgtggagcttctgctcagctacaggcgg
cccagtggagagaggcaggtcccaactctgatgatggacacccagttctctgagttcaca
ccagatatcacacccattatgctggccgcccacaccaacaactatgaaatcatcaaattg
cttgttcagaaacgggtcactatcccaaggccccaccagatccgctgtaactgtgtggag
tgtgtgtccagctcagaggtagacagcctgcgtcactcccgctccagactgaacatctat
aaagctctggcaagcccttcactcattgctttgtcaagtgaggatcccatcctaaccgcc
ttccgcctaggctgggagctcaaggagctaagcaaagtggaaaatgagttcaagactgag
tatgaggagctctcccagcaatgcaagctatttgccaaagacctactagaccaggctcgg
agttcccgggaactagagatcatcctcaatcacagagatgaccacagtgaagaacttgac
cctcaaaagtaccatgacctggcaaaactgaaggtagcaatcaaataccaccagaaagag
tttgtagctcagcctaattgccaacaattacttgccactctgtggtatgatggattccct
ggatggaggcgaaaacactgggtagtcaagcttctgacttgcatgaccattgggttactg
tttcccatgctgtctatagcatatctaatctcacccaggagtaaccttgggttgttcatc
aagaaaccctttatcaagttcatctgccacacagcatcatatttgaccttcctcttcatg
cttctactggcttctcaacacatcgtcaggacagacctccacgtacaggggcctcctcca
actgttgtggaatggatgatattgccttgggttctcggtttcatttggggggagattaag
gaaatgtgggatggaggatttactgaatatatccatgactggtggaacttgatggatttt
gcaatgaactcactgtacctggcaactatttccttgaagattgtggcctatgtcaagtat
aatggttctcgtccaagggaagaatgggaaatgtggcacccaactctgattgcagaagca
ctctttgcgatatccaacattttaagttccttgcgtctcatatccctattcacagccaac
tcccacttagggcctctgcagatttctttggggcgcatgttgcttgatatcctcaaattc
ctctttatctactgcctggtactgctggcttttgccaatggattgaaccagctttacttt
tattatgagaccaaagcgatcgatgagcctaacaactgcaaagggatccggtgtgaaaaa
cagaacaatgccttctccacgctctttgaaacccttcagtcactcttctggtctgtattt
ggccttttaaatctctatgtcaccaatgtgaaagccaggcacgagtttacagagtttgtg
ggagctaccatgtttgggacatacaatgtcatctccctggtagtgctgcttaacatgctg
atcgccatgatgaacaactcctaccagcttattgccgatcatgcagatatcgagtggaag
tttgcaaggacgaagctctggatgagttactttgatgaaggtggtaccttgccacctcct
ttcaacattatccctagccccaagtcatttatataccttggtaactggttcaacaataca
ttctgccccaagagagaccctgatggtagacgaagacgacacaacctgagaagcttcaca
gaacgccatgctgacagcttcatacagaatcaacattaccaggaggttataaggaattta
gtcaaaagatacgtggctgctatgataagaaattccaaaacaaatgaaggactaacagaa
gaaaattttaaggaattaaaacaagacatctccagctttcgatatgaagtacttgacctc
ctaggaaacagaaaacacccaaggagaagtttttccactagcagcgccgaactctctcag
agggatgataccaatgatggcactggtggcgcacgggccaaatccaaaagtgtctctttc
aatgtgggctgcaagaaaaaggcctatcatggaccacctctcatcagaaccatgccaaga
accagtggcacgcaagggaaatcaaaagctgaatcatcaagcaaacgctcctttatgggg
ccttctctcaagaaactaggtttcttatttaacaggtttaataatggtcattcatctgaa
cctagttcagagccaatgtacacaatttctgatggaatcgttcagcagcactatatgtgg
caggacatcagatattctcagatggagaaagggaaagcagaggcatgttctcaaagtgaa
attaacctcagtgctgcagaattaggtgaagctcggggtactgctcagaccagtgaatgc
cctctagcctgttccagctctcttcaatgcatatccagcatttgttcctcaaattctaaa
cttttagactcctcagaggatgtatttgaaacttggggagaggcgtgtgacctgctcatg
cacaaatggggtgatggacaagaagaacaagttacaactcggctttaa
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