KEGG   Sorex fumeus (smoky shrew): 130035214
Entry
130035214         CDS       T10594                                 
Name
(RefSeq) patr class I histocompatibility antigen, A-2 alpha chain-like isoform X1
  KO
K06751  MHC class I antigen
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum04144  Endocytosis
sfum04145  Phagosome
sfum04218  Cellular senescence
sfum04514  Cell adhesion molecule (CAM) interaction
sfum04612  Antigen processing and presentation
sfum04940  Type I diabetes mellitus
sfum05163  Human cytomegalovirus infection
sfum05165  Human papillomavirus infection
sfum05166  Human T-cell leukemia virus 1 infection
sfum05167  Kaposi sarcoma-associated herpesvirus infection
sfum05168  Herpes simplex virus 1 infection
sfum05169  Epstein-Barr virus infection
sfum05170  Human immunodeficiency virus 1 infection
sfum05203  Viral carcinogenesis
sfum05320  Autoimmune thyroid disease
sfum05330  Allograft rejection
sfum05332  Graft-versus-host disease
sfum05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    130035214
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130035214
   04145 Phagosome
    130035214
  09143 Cell growth and death
   04218 Cellular senescence
    130035214
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    130035214
   04612 Antigen processing and presentation
    130035214
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    130035214
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    130035214
   05170 Human immunodeficiency virus 1 infection
    130035214
   05168 Herpes simplex virus 1 infection
    130035214
   05163 Human cytomegalovirus infection
    130035214
   05167 Kaposi sarcoma-associated herpesvirus infection
    130035214
   05169 Epstein-Barr virus infection
    130035214
   05165 Human papillomavirus infection
    130035214
  09163 Immune disease
   05320 Autoimmune thyroid disease
    130035214
   05330 Allograft rejection
    130035214
   05332 Graft-versus-host disease
    130035214
  09166 Cardiovascular disease
   05416 Viral myocarditis
    130035214
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    130035214
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfum04147]
    130035214
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:sfum00537]
    130035214
Exosome [BR:sfum04147]
 Exosomal proteins
  Proteins found in most exosomes
   130035214
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:sfum00537]
 Antigens
  130035214
SSDB
Motif
Pfam: MHC_I C1-set Ig_3 C2-set_2 ig C2-set_3 MHC_I_C Ig_2
Other DBs
NCBI-GeneID: 130035214
NCBI-ProteinID: XP_055982756
LinkDB
Position
Unknown
AA seq 354 aa
MWEVRPLLLLLSGALALTQTWAGPHSLRYFYTTMFRPGRGEPRFIIVGYVDDTQFVRFDS
DSASPRMEPRVLWAEPNRTKHWEEETRRAKNIAQTFRVNLNTLRGYYNQSEAGSHTLQRM
YGCEVGSDGRLLRGYDQSAYDGADYIALNEDLRSWTAAAGTQAWITQQKWEQAGAAEDHR
NYLENTCVPSLLRYLKKGKDTLLRAEAPRRHITRHPFSDHEVTLRCWALGFYPAEITLTW
QRDGKDLTQDTELVETRPSGDNRTFQKWVAVVLPSGEEQRYMCRVQHQGLPEPVTLRWEP
PSQSSILTVGIIVGLALLGAVVFGAVVRTVICRRNRSDSDSSQSSDVSLTNPIV
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgtgggaggtgcgacccctcctgctgctgctctcgggggccctggccctgacccagacc
tgggcgggcccccactccctgcggtatttctacaccaccatgttccggcctggccgcggg
gagccacgcttcattatcgtgggctacgtggacgacacgcagttcgtgcgcttcgacagc
gactcagcgagtccgaggatggagccgcgggtgctgtgggcggagccgaaccgaaccaag
cactgggaggaggagacgcggagagccaagaacatcgcacagactttccgagtgaacctg
aacaccctgcgcggctactacaaccagagcgaggcgggctctcacacccttcagaggatg
tacggctgcgaagtggggtccgatgggcgcctcctgcgcgggtacgaccaatccgcctac
gacggcgccgactacatcgccctcaacgaggacctgcgctcctggacggcggcggcgggc
acgcaggcttggatcacccagcaaaagtgggagcaggcgggtgcggctgaggaccacagg
aactacctagagaacacctgtgtgccttcgctcctcagatacctgaagaaagggaaggac
acgctgctgcgcgcagaagcccccagaagacacataacccgccatcccttctctgaccat
gaggtcaccctgaggtgctgggccctgggcttctaccctgccgagatcaccctgacctgg
cagcgtgatgggaaggacctgacccaggacacagagctggtggagaccaggccttcaggg
gacaacagaaccttccagaagtgggtggctgtggtgctgccttctggagaggagcagaga
tacatgtgccgtgtgcagcaccagggactgccggagcctgtcaccctgagatgggaaccc
ccttctcagtccagcatcctcactgtgggcatcattgttggcttggctctcctcggggct
gtggtctttggagctgtggtgagaactgtgatctgcaggaggaatcgctcagacagcgac
agttcccagagctctgatgtgtctctcacaaatcctatagtgtga

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