KEGG   Sorex fumeus (smoky shrew): 130035215
Entry
130035215         CDS       T10594                                 
Name
(RefSeq) class I histocompatibility antigen, Gogo-B*0102 alpha chain-like
  KO
K06751  MHC class I antigen
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum04144  Endocytosis
sfum04145  Phagosome
sfum04218  Cellular senescence
sfum04514  Cell adhesion molecules
sfum04612  Antigen processing and presentation
sfum04940  Type I diabetes mellitus
sfum05163  Human cytomegalovirus infection
sfum05165  Human papillomavirus infection
sfum05166  Human T-cell leukemia virus 1 infection
sfum05167  Kaposi sarcoma-associated herpesvirus infection
sfum05168  Herpes simplex virus 1 infection
sfum05169  Epstein-Barr virus infection
sfum05170  Human immunodeficiency virus 1 infection
sfum05203  Viral carcinogenesis
sfum05320  Autoimmune thyroid disease
sfum05330  Allograft rejection
sfum05332  Graft-versus-host disease
sfum05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    130035215
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130035215
   04145 Phagosome
    130035215
  09143 Cell growth and death
   04218 Cellular senescence
    130035215
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    130035215
   04612 Antigen processing and presentation
    130035215
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    130035215
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    130035215
   05170 Human immunodeficiency virus 1 infection
    130035215
   05168 Herpes simplex virus 1 infection
    130035215
   05163 Human cytomegalovirus infection
    130035215
   05167 Kaposi sarcoma-associated herpesvirus infection
    130035215
   05169 Epstein-Barr virus infection
    130035215
   05165 Human papillomavirus infection
    130035215
  09163 Immune disease
   05320 Autoimmune thyroid disease
    130035215
   05330 Allograft rejection
    130035215
   05332 Graft-versus-host disease
    130035215
  09166 Cardiovascular disease
   05416 Viral myocarditis
    130035215
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    130035215
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfum04147]
    130035215
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:sfum00537]
    130035215
Exosome [BR:sfum04147]
 Exosomal proteins
  Proteins found in most exosomes
   130035215
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:sfum00537]
 Antigens
  130035215
SSDB
Motif
Pfam: MHC_I C1-set MHC_I_C C2-set_3 C2-set_2 Ig_3 ig Ig_2 DUF441
Other DBs
NCBI-GeneID: 130035215
NCBI-ProteinID: XP_055982759
LinkDB
Position
Unknown
AA seq 364 aa
MWKTRLLLLLLSGALALTQTWAGTHSMRYFEFGVSRPGRGDSRFIAVGYVDDTQFVRFDS
DSASQRMEPRAPWVGQEGPEYWEESTRRAKGTAQIFRANLNTALRYYNQSETDSHTFQRM
YGCDVVSDGRLLRGYDQYSYDGADYIALNEDLRSWTAAEGTQAWISKSKFEQGGEAEYSR
NYLENDCVQWLLRHLEHGKDTLLRAEPPRRHITHHPFSDREVTLRCWALGFYPAEITLTW
QREGEDLTQDTELVETRPSGDGTFQKWAAVVVPSGEEQRYTCRVQHQGLLEPVTLRWEPP
SHFTILTVGTIVGLVLLGTVVTGAVVAAVIYRKKRSGEKGGQYTQAANSDSSQGSDEPLS
NPRV
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgtggaagacgcggctcctcctgctgctgctctccggggccctggccctgacccagacc
tgggcaggcacccactccatgaggtattttgaattcggcgtgtcccggccgggccgcggg
gactcccgcttcatcgccgtcggctacgtggacgacacgcagttcgtgcgcttcgacagc
gactcggcgagtcagaggatggagccgcgggcgccgtgggtggggcaggagggacccgag
tactgggaggagagcacgcggagagccaagggcaccgcacagattttccgagcgaacctg
aacaccgcgctacgctactacaaccagagcgagacggactctcacaccttccagaggatg
tatggctgcgacgtggtgtcggacgggcgcctcctgcgcgggtacgaccaatactcctac
gacggcgccgactacatcgccctgaacgaggacctgcgctcctggacggcggctgagggc
acgcaggcttggatcagcaagagcaagttcgagcaggggggtgaggctgagtacagcagg
aactacctggagaatgactgcgtgcagtggctcctcagacacctggagcacgggaaggac
acgctgctgcgcgcagaaccccccaggagacacataacccaccaccccttctctgaccgt
gaggtcaccctgaggtgctgggccctgggcttctaccctgccgagatcaccctaacctgg
cagcgtgagggggaggacctgacccaggacacagagctggtggagaccaggccctcaggg
gatggaaccttccagaagtgggcggctgtggtggtgccttctggagaggagcagagatac
acgtgccgtgtgcagcaccaggggctgctggagcctgtcaccctgagatgggagccccct
tctcatttcaccatcctcactgtgggcaccattgttggcctggttctactcggcactgtg
gtcactggagccgtggtggcagctgtgatctacagaaagaaacgctcaggtgagaaagga
ggacagtacactcaggctgcaaacagcgacagttcccaaggctctgatgagcctctctcg
aatcctagagtgtga

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