Sorex fumeus (smoky shrew): 130035634
Help
Entry
130035634 CDS
T10594
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Ion channels [BR:
sfum04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
130035634 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130035634
NCBI-ProteinID:
XP_055983428
LinkDB
All DBs
Position
Unknown
AA seq
1832 aa
AA seq
DB search
MASASLPTLLPLGPESLRPFTPESLAAIEQRAVEEEARLLRNKQMEIEEPERKPRSDLEA
GKSLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKSIFRFSATPALYLLSPFSIV
RRCAIKVLIHSLFSMFIMITILTNCVFMTMSNPPPWSKDVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVITMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNATVFGNDTW
LDFTGLGNDTWFINDTWFSNDTWNSSDTWNSSDTWNSHEGWASNFTFDWDAYINDEGNYY
FLEGSNDALLCGNSSDAGHCPEGYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWE
NLFQLTLRAAGKTYMVFFVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQ
QMLEKYKKHQEEVEKAKAAQALEGGDADGDPAHSKDCNGSVDAAPGEQDSGISDAMEELE
EAHQKCPPWWYKCSQKVLIWNCCSPWVQFKHIIHLIVMDPFVDLGITICIVLNTLFMAME
HYPMTDHFDHVLYVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSFIVTLSLVELG
LANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKIASDCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQPMC
LTVFLMVMVIGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGISFAKT
FLLGLLHGQVLRPKDIILRIGKLGEAADAAGDSAPEDKDEKKEPLPADGEQDMKKDNHIL
NHVGLADGAPPSIELDHLNFINNPYLTIHVPIASEESDLDLPTEEETDTFSEPEDIKKLT
QPPCDGTSSVCSTADYKPPEEDPEEQAEEQAEEEPEECFTEACVQRWPCLSVDVSQGRGK
QWWTLRRACFRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRMIRTILEYADKVFTYI
FIIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALR
PLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTS
ERFDISEVNNKSQCESLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVD
SREQEEQPQYEVNIYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVYDFVTKQVFDITIMILICLNMVTMMVETD
DQSQLKVDILYYINMVFIIVFTGECVLKMFALRHYYFTVGWNIFDFVVVILSIVGLALSD
LIQKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFI
YSIFGMSNFAYVKKESGIDDMFNFETFGNSIICLFMITTSAGWDGLLNPILNSGPPDCDP
MLENPGSSVLGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESTEPLCED
DFEMFYETWEKFDPDATQFIAYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIH
CLDILFALTKEVLGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIRIQ
RAFRRHLLRRSVKQASYLSRHSLDGSGAGAPEKEGLIAESMNRMYGPESATSDTAQHPAE
DRGAAEDAGPATPSPPAPQAQTVRPGVKESLV
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgcgtctctgcccaccctgttgccgctgggccctgagagcctgcgccccttc
acccccgagtccctggcggccatagagcagcgggcagtggaggaggaagcccggctgctg
cggaacaagcagatggagatcgaggagcccgagcggaagccacgcagtgacctggaggct
ggcaagagcctgcccctgatctatggggaccccccgcccgaggtcatcgggatccccctg
gaggacctggacccctactacagcgacaagaagaccttcatcgtgctcaacaagggcaag
tccatcttccgcttctcggccacacctgctctctacctgctgagtcccttcagcattgtc
cggcgctgcgccatcaaggtgctcatccactcgctgttcagcatgttcatcatgatcacc
atcttgaccaactgtgtgttcatgaccatgagtaacccgccgccctggtccaaggacgtg
gagtataccttcacgggcatctacaccttcgagtccctcatcaagatgctggcgcgtggc
ttctgcatcgacgatttcacattcctccgggatccctggaactggctggacttcagtgtc
atcacgatggcctatgtgacagagtttgtggatttgggaaacatatcagcactgagaacc
ttccgggtgctgcgggccctgaaaaccatcacggtcatcccagggctgaagacgatcgtg
ggggccttgatccagtcggtgaagaaactgtcagacgtgatgatcctcacggtcttctgc
ctgagcgtcttcgcgttggtggggctgcagctcttcatggggaacctgcggcagaagtgc
gtgcgctggcccccacccttcaacgacaccaacgccaccgtgttcggcaatgacacctgg
ctggacttcacggggcttggcaacgacacctggtttatcaatgacacctggttcagcaat
gacacctggaatagcagtgacacctggaacagcagcgacacctggaacagccacgagggc
tgggccagcaacttcacctttgactgggacgcgtacatcaacgatgaagggaactactac
tttctggagggatccaacgatgccctgctctgtgggaacagcagtgacgctgggcactgc
cctgaggggtacgagtgcatgaaggctgggcggaaccccaactacggctacacaagctac
gacaccttcagctgggccttcctggccctcttccgccttatgacgcaggactactgggag
aacctcttccagctgacccttcgagccgccggcaagacctacatggtcttcttcgtggtc
atcatcttcctgggctccttctacctcatcaacttgatcctggcggtcgtggccatggcg
tatgcggagcagaacgaggccacgctggccgaggaccaggagaaggaggaggagtttcag
cagatgttggagaagtacaaaaagcaccaggaggaggtggagaaggccaaggccgcccag
gctctggaaggcggggatgcagatggggaccctgcccacagcaaagactgtaatggcagt
gtggatgcggcacccggagagcaggacagcggcatctcggacgcgatggaagagctggaa
gaggcccaccagaagtgcccgccgtggtggtacaagtgctcgcagaaggtgctcatctgg
aactgctgctcgccatgggtgcagttcaagcacatcatccacctcatcgtcatggaccca
tttgtggacctgggcatcaccatctgcatcgtgctcaacacactcttcatggccatggag
cactaccccatgaccgatcacttcgaccacgtgctctacgtcggcaacctggtcttcaca
ggcatcttcacggccgagatggtgctgaagctcatcgccatggacccctatgagtacttc
cagcaaggctggaacatcttcgacagtttcatcgtcaccctcagcctggtggagctgggc
ctggccaacgtgcaggggctgtcggtgctccgctccttccgcctgcttcgggtcttcaag
ctggccaagtcatggccgaccctaaacatgctcatcaagatcatcggcaactcggtgggc
gccctgggcaacctgaccctggtgctggccatcatcgtgttcatcttcgccgtggtgggc
atgcagctgttcggcaagagctacaaggagtgcgtgtgcaagatcgcctccgactgcagc
ctgcctcgctggcacatgcacgacttcttccactccttcctcatcgtcttccgcatcctg
tgcggcgagtggatcgagaccatgtgggactgcatggaggtggccggccagcccatgtgc
ctcacggtcttcctcatggtcatggtcatcggcaacctggtggtcctgaacctgttcctg
gcgctgctgctgagctccttcagtgccgacagcctggcggcctcggacgaggacggggag
atgaacaacctgcagatcgccatcgggcgcatcaagtggggcatcagcttcgccaagacc
ttcctgctgggcctgctgcacggccaggtcctgcggcccaaggacattatcctgcgtatc
gggaagctcggggaggctgccgacgccgctggggacagcgcccccgaggacaaggatgag
aagaaggagccactgccggccgatggggagcaggacatgaagaaggacaaccacatcctg
aaccacgtgggcctggctgacggcgcaccccccagcatcgagctggaccacctcaacttc
atcaacaacccctacctcaccatccatgtgcccatcgcctccgaggagtcggacctagac
ctgcccacagaggaggagaccgacaccttctctgagcccgaggacatcaagaagttgact
cagcccccctgcgacgggacctcctcagtctgtagcacagccgactacaagccccccgag
gaggaccccgaggagcaggccgaggagcaggccgaggaggagcctgaggagtgtttcacc
gaggcctgtgtgcagcgctggccatgcctgtccgtggacgtctcccagggccgggggaag
cagtggtggacactgcgccgggcctgcttccggatcgtcgagcacaactggttcgagacc
ttcatcgtcttcatgatcctgctcagcagcggagccctggccttcgaggacatctacatt
gagcagcggcgcatgatccgcaccatcctggagtatgcggacaaggtgttcacctacatc
ttcatcatcgagatgctgctcaagtgggtggcatatggcttcaaggtctacttcaccaac
gcctggtgctggcttgacttcctgatcgtcgacgtctccatcatcagcctggtggccaac
tggctgggctactcggagctggggcccatcaaatccctgcggacacttcgggcgctgcgc
cccctcagggcactgtcacgattcgagggcatgagggtggtggtgaacgcccttctgggc
gccatcccgtccatcatgaacgtgctgcttgtctgcctcatcttctggctcatcttcagc
atcatgggcgtcaacctgttcgctggcaagttctactactgcatcaacaccaccacgtcg
gagaggttcgacatctccgaggtcaacaacaagtcacagtgcgagagcctcatgcacacg
ggccaggtccgctggctcaacgtcaaggtcaactatgacaacgtgggcctaggctacctc
tcgctcctgcaggtggctacattcaagggctggatggacatcatgtacgcggctgtggac
tcacgagagcaagaggagcagccgcagtatgaggtgaacatctacatgtacctatacttc
gtcatattcatcatctttggctccttcttcacactcaacctcttcatcggcgtcatcatt
gacaatttcaaccagcagaagaagaagtttggagggaaagacatcttcatgacagaggag
cagaagaagtactacaatgccatgaagaagctgggctccaagaagccacagaagcccatc
ccgcggccccagaacaagatccagggcatggtgtacgacttcgtcaccaagcaggtgttc
gacatcaccatcatgatcctcatctgcctcaacatggtcaccatgatggtggagacagac
gaccagagccagctgaaggtggacatcctgtactacatcaacatggtcttcatcatcgtc
ttcaccggcgagtgcgtgctcaagatgtttgcactgcgccactactacttcaccgtcggc
tggaacatcttcgacttcgtggtggtcatcctgtccatcgtgggcctcgcgctgtccgac
ctgatccagaagtactttgtgtcgcccactctgttccgtgtgatccgcctggcacgtatc
ggccgtgtcctacggctcatccgcggcgccaagggcatccgcacactgctcttcgccctc
atgatgtccctgcccgcgctcttcaacatcggcctccttctcttcctcgtcatgttcatc
tactccatcttcggcatgtccaactttgcctatgtcaagaaggagtcgggcatcgatgat
atgtttaacttcgaaacctttggcaacagcatcatctgcctcttcatgatcaccacgtcg
gcgggctgggatgggctcctgaaccccatcctcaacagcgggccgcccgactgcgacccc
atgctggagaatccaggctcgagcgtgctgggggactgcggcaacccgtccatcggcatc
tgcttcttctgcagctacatcatcatctccttcctcatcgtggtcaacatgtacatcgcc
atcatcctggagaacttcaacgtggccacggaggagagcaccgagccgctgtgcgaggac
gacttcgagatgttctacgagacctgggagaagttcgaccccgatgccacgcagttcatc
gcctacagccgcctctcggactttgtggacacgctgcaggaaccgctgcgcatcgccaag
cccaacaagatcaagctcatcacgctggacctgcccatggtgcccggggacaagatccac
tgcctggacatcctcttcgccctgaccaaggaggtcctgggcgactcgggggagatggac
gccctcaagcagaccatggaggagaagttcatggccgccaacccctccaaggtctcctac
gagcccatcaccaccaccctcaagaggaagcacgaggaggtgtgcgccatccgcatccag
agggccttccgccgccacctgctccgccgctccgtcaagcaggcctcctacctgtcacgc
cacagcctggacggcagcggggccggcgcccccgagaaggagggtctcatcgccgagtcc
atgaacaggatgtacggccctgagagcgccaccagcgatacggcacagcacccagccgag
gacaggggtgctgcggaggacgctgggcctgccacgccttctccgcccgcaccccaggct
cagacggtgcgtccaggggtcaaggagtctctggtctag
DBGET
integrated database retrieval system
