KEGG   Sorex fumeus (smoky shrew): 130035946
Entry
130035946         CDS       T10594                                 
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum01524  Platinum drug resistance
sfum03440  Homologous recombination
sfum03460  Fanconi anemia pathway
sfum04120  Ubiquitin mediated proteolysis
sfum04151  PI3K-Akt signaling pathway
sfum05206  MicroRNAs in cancer
sfum05224  Breast cancer
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130035946 (BRCA1)
  09124 Replication and repair
   03440 Homologous recombination
    130035946 (BRCA1)
   03460 Fanconi anemia pathway
    130035946 (BRCA1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    130035946 (BRCA1)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    130035946 (BRCA1)
  09162 Cancer: specific types
   05224 Breast cancer
    130035946 (BRCA1)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    130035946 (BRCA1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sfum01009]
    130035946 (BRCA1)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sfum04121]
    130035946 (BRCA1)
   03036 Chromosome and associated proteins [BR:sfum03036]
    130035946 (BRCA1)
   03400 DNA repair and recombination proteins [BR:sfum03400]
    130035946 (BRCA1)
Enzymes [BR:sfum01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130035946 (BRCA1)
Protein phosphatases and associated proteins [BR:sfum01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     130035946 (BRCA1)
Ubiquitin system [BR:sfum04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    130035946 (BRCA1)
  Multi subunit type E3
   BRCC complex
    130035946 (BRCA1)
Chromosome and associated proteins [BR:sfum03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     130035946 (BRCA1)
DNA repair and recombination proteins [BR:sfum03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     130035946 (BRCA1)
    BRCA1-A complex
     130035946 (BRCA1)
    BRCA1-B complex
     130035946 (BRCA1)
    BRCA1-C complex
     130035946 (BRCA1)
    BRCA complex
     130035946 (BRCA1)
   FA (Fanconi anemia) pathway
    Downstream FA components
     130035946 (BRCA1)
SSDB
Motif
Pfam: BRCT zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 RING_XB3-XBAT31 zf-RING_6 zf-Nse BRCT_2 zf-RING_10 zf-ANAPC11 Prok-RING_4 zf-rbx1 RTT107_BRCT_5 zf-RING_4 Baculo_IE-1 DUF1908
Other DBs
NCBI-GeneID: 130035946
NCBI-ProteinID: XP_055983862
LinkDB
Position
Unknown
AA seq 515 aa
MDLSMDHVEEVQNILNAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKEPSQ
CPLCKNDITKRSLQESTRFSQLVEELLKIIHAFELDTGLQFANSYNFLKKENNATEHLKE
EASIIQSMGYRNRGKKLRQTETENSTLQESSLSVKLSNPGIVRSLKTKQQLQSRKKSVYI
ELGSDSSEDSFNKASYCSLGDNGLLQIIPREANIETSVNSAKKAVCEFSEDITDTEHHQP
SNKDLTTTEKHTATEKDTEKYQSKAASGYVSETSFSEDSSELSSQSAILTTQQKDTMQDN
LIKLQKEMAQLEAVLEQHGNQPRCSSPRADPCAPEDLLNPEQDTSDEDAEFVCERTLKYF
LGIAGGKWIVSYFWVTKSIKERKILDEHDFEVKGDVVNGRNHQGPKRARESQDRKIFRDL
EICCYGPFTNMPTDQLEWMLRLCGASVVKELSSFTRSKGRHPVVVVQPDAWTEDSGFHAI
GQLCEAPVVIREWVLDSVVLCQRQKLDNYLVPQIP
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggatttgtccatggatcacgttgaagaagtacaaaatatccttaatgctatgcagaaa
atcttagaatgtcctatctgtctggaattgatcaaagagcctgtttccacaaagtgtgac
cacatattctgcaaattctgtatgttgaaacttctcaaccagaagaaagaaccttcacag
tgtcctttgtgtaagaatgatataaccaaaagaagtctgcaagaaagtacaagattcagc
cagcttgtggaagaactattgaaaatcattcatgcttttgaacttgacactggattacag
tttgcaaacagttataactttttgaaaaaggaaaataatgctaccgaacatctaaaggag
gaggcttctattatccaaagtatgggctaccgaaaccgtggcaaaaaacttcgacagact
gaaactgaaaattctactctgcaggaatccagtctgagtgtcaaactttctaaccctgga
attgtgagatctctgaagacaaagcagcagctacaatcccgtaaaaagtctgtctacatt
gaacttggatctgattcttctgaagattcatttaataaagcaagttattgcagtttggga
gacaatggattgttacaaatcatccctcgtgaagccaatattgaaaccagtgtgaattct
gcaaaaaaagctgtttgtgagttttctgaggacattacagatactgaacatcatcaacct
agtaataaagatttgaccaccactgagaagcatactgcaactgagaaggatacagaaaag
tatcagagtaaagcagcttctgggtatgtgagtgaaacaagtttctctgaagactcttca
gagctgtcctctcagagtgctattttaaccactcagcagaaggataccatgcaagataac
ctgataaagctccagaaggaaatggcccaactagaagctgtgttagagcaacatggaaac
caacctcgctgttcttctcccagagctgatccttgtgcccctgaggacctgctcaatcca
gaacaagacacatcagacgaagatgctgaatttgtgtgtgaacggacactgaaatatttt
ctgggaattgcaggaggaaaatggatagttagttatttttgggtgacaaagtctattaaa
gaaagaaagatactggatgagcatgattttgaagtcaaaggagatgttgttaatggaaga
aaccaccaaggcccaaagagagcaagagaatcccaagacagaaagatcttcagagactta
gaaatttgttgctatggaccctttaccaacatgcccacagatcaactggagtggatgttg
cgcctctgtggggcttctgtggtaaaagagctttcatcatttacccgtagcaagggtagg
cacccagttgtggttgtacaaccagatgcctggacagaggacagtggcttccatgcaatt
gggcagctttgtgaggcacctgtggtgatccgggaatgggtattggacagcgtagtcctc
tgccaacgccaaaaattggacaactacctggtacctcagatcccctag

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