KEGG   Sorex fumeus (smoky shrew): 130037272
Entry
130037272         CDS       T10594                                 
Symbol
IFT122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
sfum  Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sfum03037]
    130037272 (IFT122)
Cilium and associated proteins [BR:sfum03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   130037272 (IFT122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 WD40 Beta-prop_EML_2 WD40_WDHD1_1st Zn_ribbon_IFT122_C WD40_Prp19 WD40_CDC20-Fz EIF3I ANAPC4_WD40 WDR55 Beta-prop_TEP1_2nd TPR_IF140-IFT172 Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 NBCH_WD40 WD40_MABP1-WDR62_2nd TPR_GEMI5 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML TPR_IFT80_172 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_Vps41 TPR_7 WDR90_beta-prop_4th eIF2A WD40_MABP1-WDR62_1st B-prop_COPA_B_2nd Beta-prop_HPS5 Beta-prop_IFT140_2nd TPR_COPA_B Beta-prop_WDR75_1st Beta-prop_SPT8
Other DBs
NCBI-GeneID: 130037272
NCBI-ProteinID: XP_055984966
LinkDB
Position
Unknown
AA seq 1182 aa
MRAVLTWRDKAEQCIYDLAFKPDGTQLILAAGNRLLVYDTSDGTLLQPLKGHKDTVYCVA
YAKDGKRFASGSADKSVIIWTSKLEGILKYTHNDSIQCVSYNPVTHQLASCSSSDFGLWS
PEQKSVSKHKASSKITCCSWTNDGQYLALGMFNGIISIRNKNGEEKVKIERPGGSHSSIW
SMSWNPSREERNDILAVADWGQKLSFYQLSGKQIGKDRPLNFDPCCISYFTKGEYILLGG
SDKQVSLFTKDGVRLGTVGEQNSWVWTCKAKPDSNYVVVGCQDGTISFYQLIFSTVHGLY
KDRYAYRDSMTDVIVQHLITEQKVRIKCKELVKKIAIYKNRLAIQLPEKILIYELYSDDS
SDMHYRVKEKIVKKFECNLLVVCADHIILCQEKRLQCLSFRGVKEREWQMESLIRYIKVI
GGPPGREGLLVGLKNGQILKIFVDNLFAIVLLKQATAVRCLDMSASRNKLAVVDENDTCL
VYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGGGHLNIKASTFPVHQQKLQGFVVGYNG
SKIFCLHVFSMSAVEVPQSAPMYQYLDRKLFKEAYQIACLGVTDTDWRELAMEALEGLEF
ETAKKAFTRVQDLRYLELISSIEERKKRGETNNDLFLADVFSYQGKFHEAAKLYKKSGHE
SLALDMYSDLRMFEYAKDFLGSGDPKETKMLITKQADWARNINEPKAAVEMYMSAGEHTK
AIEISGDHGWVDMLIDIARKLDKAEREPLLLCAQYFRKLENPGYAAETYLKIGDLKSLIR
LHVDTQRWDEAFALGEKHPEYKDDIYVPYAQWLAENDRFEEAQKAFHKAGRQQEAVRVLE
QLTHNAVVESRFNDAAYYYWKLSMQCLNIAQDPVQEASMLSKFHHYQHLAELYHGYHAIH
RYLEEPFSFHLPETLFNISRFLLHSLTKDTPLGISKVKTLYTLAKQSKALGAYKLARHTY
DKLQGLKVPDKFQKCIELGSLTIRSKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCRQ
PFVFSASSYEVLHLVEFYLEDGITDEEAVALINLEAPTQKHETKWQEVTSSNSQTLRLDE
SADTMGDSDPFTAKLSFEQGGSEFVPVVVNRSVLRSMSRRDVLIKRWPRPLRWQYFRSLL
PGAAVTMCPSCFQMFHSEDYELLVLQHTCCPYCRHRTDDPGE
NT seq 3549 nt   +upstreamnt  +downstreamnt
atgagggccgtgttgacgtggagagataaagccgagcagtgtatctatgaccttgcgttt
aagcccgatggaacccaactgattttggctgcaggaaacagattactggtttatgacacc
tctgatggcaccttacttcagcccttaaaaggacacaaagatacagtgtactgtgtggca
tatgcaaaggacggcaagcggtttgcttctggatcagctgacaagagtgttattatctgg
acgtcaaaattggaaggcattctgaagtacacgcacaacgattctatccagtgtgtctcc
tacaaccccgttacccaccaactggcatcttgttcctccagtgactttggcttgtggtct
cctgagcagaagtctgtctccaagcacaaagccagcagcaagatcacctgctgcagctgg
acaaatgatggtcagtacctggctctgggcatgttcaatggaatcatcagcatacggaac
aaaaacggggaggagaaagtcaagatcgagcggccggggggctcgcactcctcgatatgg
tccatgagctggaacccttccagagaggaacgtaatgacatcctggccgtggctgactgg
gggcagaaactttccttctaccagctgagcggaaagcagattgggaaggaccgcccgctg
aactttgacccctgctgcatcagctactttactaaaggggaatacattttgttagggggg
tcggacaagcaagtatcccttttcaccaaggatggagtgcggcttgggaccgtgggggaa
caaaattcctgggtgtggacatgtaaagcgaaacccgattcgaactatgtggtggtcggc
tgtcaggacggcaccatttccttttaccaacttattttcagcaccgtccatgggctctac
aaggaccgctatgcctacagggacagcatgactgacgtcatcgtgcagcacctgatcact
gaacagaaagttcggattaaatgcaaagagcttgtcaagaaaattgccatctacaaaaat
cgattagctatccaactgccggagaagattctcatctatgagttgtattccgatgattcg
tcagacatgcattaccgggtgaaggagaagattgtcaagaagtttgaatgcaacctcctg
gtggtgtgtgctgaccacatcatcctgtgccaggagaagcgtctgcagtgtctgtccttc
cgtggagtgaaggagcgcgagtggcagatggagtctctcattcgctacatcaaggtcatc
ggtggccctccgggcagggaaggcctgttagtgggcctgaagaatggacagatcctgaag
atcttcgtggacaatctctttgctatcgtcctgctgaagcaggccacggctgtgcgctgc
ttggacatgagcgcctcccgcaacaagctggctgtagtggacgagaacgacacgtgtctg
gtgtatgacatccacaccaaggagctgcttttccaggagcccaacgccaacagcgtggcc
tggaacacgcagtgtgaggacatgctgtgcttctcgggcgggggccacctcaacatcaag
gccagcaccttccccgtgcaccagcagaagctgcagggcttcgtggtgggctacaacggc
tccaagatcttctgtctccacgtcttctccatgtccgctgtggaggtgccgcagtcagcg
ccaatgtaccagtacctggacaggaaactgttcaaagaagcctaccagattgcttgctta
ggggtgacggacaccgactggcgcgagttggccatggaggctttagaagggttagagttt
gaaacagccaagaaggccttcaccagggtacaagacctgcggtacttagagctcatcagc
agcattgaggagaggaagaagcggggagagaccaacaatgacctgtttctggcagatgtg
ttttcctaccaggggaagttccacgaggccgccaaactgtacaagaagagcgggcacgaa
agcctcgcgctggacatgtactctgacctgcgcatgtttgagtacgccaaggatttcctt
ggatctggagaccccaaagaaacaaagatgctaatcaccaagcaggcggactgggctcga
aatatcaacgagcccaaagctgctgtggagatgtacatgtccgcgggggagcacaccaag
gccatcgagatcagcggcgaccacggctgggtggacatgttgatcgacatcgcccggaag
ctggacaaggcggagcgggagccgttgctgctgtgcgcgcagtacttcaggaagctggag
aaccccggctacgcggccgagacctacctgaagatcggcgacctgaagtccctcatccgg
ctgcacgtggacacgcagcgctgggatgaggccttcgccctgggcgagaagcatcccgag
tataaggacgacatctacgtgccctacgcacagtggctcgctgagaatgatcgttttgaa
gaggctcagaaagccttccacaaggccgggcggcagcaggaggccgtccgggtgctggag
cagctcacgcacaatgccgtggtggaaagcagattcaatgacgccgcctattattactgg
aagctgtccatgcagtgcctcaatatagctcaagatcctgtccaggaggccagcatgctc
agcaagttccaccactaccagcacctggccgagctctatcacggctaccacgccatccac
cgctacttggaggagccgttcagcttccatcttcctgaaacgcttttcaacatctccagg
ttcctgctgcacagcctgaccaaggacacccccttgggcatctctaaagtgaaaacgctc
tacaccctggccaagcagagcaaggccctgggcgcctacaagctggcccgacacacctat
gacaagctgcagggcctgaaggtccctgacaagttccagaagtgcatcgagctgggcagc
ctgaccattcgctccaagcccttccatgacagtgaggagctggtgcccttgtgctaccgc
tgctccaccaacaaccccctgctcaacaacctgggcaacgtctgcatcaactgccgccag
cccttcgtcttttccgcttcctcctacgaggtgctgcacctggtggagttctacctggag
gacggcatcaccgacgaggaggccgtggccctcatcaacctggaggcaccgacgcagaag
cacgagaccaagtggcaggaggtgacgagtagcaattcccagactctgaggctggatgag
agtgcggacaccatgggggacagtgaccccttcacagcaaagctgagttttgagcagggg
ggctcggagttcgtgcctgtggtggtgaaccgctccgtgctgcgctccatgagccgccgg
gacgtcctcatcaagcgctggcctcggcccctgcgttggcaatacttccgctcgctcctg
cccggcgctgccgtcaccatgtgcccctcctgcttccagatgttccactcggaggactat
gagctgctggttctccagcacacgtgctgcccgtactgccggcatcgcacggacgacccg
ggcgagtga

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