Sorex fumeus (smoky shrew): 130037291
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Entry
130037291 CDS
T10594
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130037291 (RNF123)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130037291 (RNF123)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130037291 (RNF123)
Multi subunit type E3
KPC complex
130037291 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
130037291
NCBI-ProteinID:
XP_055985004
LinkDB
All DBs
Position
Unknown
AA seq
1315 aa
AA seq
DB search
MASKGSGVSFPRKSYRLTSDAEKSRVTGIVPEKLLNDYLHRIFSSPDQAPATAAASRKPL
TFQNLPGHLDQLLQVDSEDEESQGQVEGRLGPSTVVLDHTSGFEGLLLVDDDLLGVIGHS
NFGTIRSTTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNRVR
KWNVTTTNYGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGVGMAYFPAISL
SFKESVAFNFGSRPLRYPVPGYRPLQDPPQADLVRAQKLLGCFRAVLSVELDPVEGRLVE
KESSEWQLQGQPTVLLTLAHIFHHFAPLLRQVYLVEAVLMSFLLDIVEAGSPAKAEALVH
QVLDLLWLFMEDYEVHDCLKQLLMSLLRLYRFSPIVPDLSLQIHYLRLTIAILKHKKSRK
FLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPHRSSKEARESKEVRDETAEE
RLRRRAYERGCQRLKKRIEVVEELQVQILKLLLDNKDDNGGEASRYIFLTKFRKFLQENA
SSRGNLPVLCPPEYMVCFLHRLISALRFYWDEHKASNPRASLSEEAYIPPQIFYNGKVDY
FDLQRLGGLLSHLRKTLKDDLASKANILIDPLELQAATMDDLDEDEEPAPAAAQRPMQAL
AMGGALPLPRPGWLSSPTLGRANRFLSTAAVSLMTPRRPLSTSEKVKVRTLSAEQRTRED
IEGGHWNEGLLLGRPPEEPEQPLTENSLLEVLDGAVMMYNLSVHQQLGKMVGVSDDVNEY
AMALRDTEDKLRRCPKRRKDILAELTKSQKVFSEKLDHLSRRLAWVHATVYSQEKMLDIY
WLLRVCLRTIEHGDRTGSLFAFMPEFYLSVAINSYSALKNYFGPVHSMEELPGYEETLTR
LAAILAKHFADTRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRIAMVRSLLAPYE
QRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSTLLQQHMADLL
RQGPDVAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLSV
SLLRVLEMTITLVPEIFLDATQPTSEMLLQRLAQLLNQVLNRVTAERNLFDRVVTLRLPG
LESVDHYPILVAVTGILVRLLVHGPASGKERATSVLLADPCFQLRSICYLLGQPEPPAPG
TALPAPDRKRFSLQSYTDYISAEELVQVEQMLTHLTSASAQAAAASLPTSEEDLCPICYA
HPISAVFQPCGHKSCKACINQHLMNNKDCFFCKATIVSVEDWEKATNASATSSAT
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaaggggtctggcgtgtctttcccccgcaagagctataggctgacatccgat
gctgagaaatccagggtcacaggcattgtgcccgagaagctgctgaatgattacctacac
cgcatcttctcttcacccgaccaggcccctgccacagccgccgccagcaggaaacccctg
accttccagaacctgccagggcatctggaccagctcttgcaggtggacagtgaggatgag
gagagccagggacaggttgaagggcgcctgggtccctctaccgtggtcctagaccacacc
agtggcttcgaggggctgcttttggtggatgatgacctcctgggggtgattggacatagc
aacttcggtaccatccgctccaccacgtgtgtgtacaaagggaagtgggtctacgaggtg
ctcatctcctcccagggcctgatgcagatcggctggtgcaccatcaactgccgcttcaat
caggaggaaggggtcggcgacactcacaactcttatgcttacgacggcaatcgggtgcgc
aagtggaacgtgaccacgacaaactacggcaaggcgtgggcggcgggggacatcgtcagc
tgcctgatcgacctggatgatggtactctgtccttttgcctgaatggtgtgtcactgggc
actgccttcgagaacctgtccaggggcgtgggcatggcctacttccccgccatcagcctt
tccttcaaggagtccgtggccttcaactttggcagccgccccctgcgctacccagtgcca
ggctaccgaccgctgcaggaccccccgcaggccgacctggttcgggcacagaagctgctg
ggctgcttccgggccgtgctcagcgtggaactggaccctgtggagggccggctggtggag
aaggagagctccgagtggcagctgcagggccagcccacggtcctgctcacactggcccac
atcttccaccattttgccccactcctgcgccaggtttacctggtggaggccgtgctcatg
agcttcctgctggacatcgtggaggcgggcagccccgccaaggcagaggccctggtacac
caagtcctggacctgctgtggctcttcatggaggactacgaggtccacgattgtctcaag
cagttgctgatgtccctgctgaggctgtaccgtttctcgcccattgtcccagacctgagc
ctgcagatccactacctacggctcaccatcgccatcctgaagcacaagaagtcacgcaag
tttctgctcagcaatgtcctcttcgacgtgctccgctccgtcgtcttcttttacatcaag
agtcccctgcgcgtggaggaggcaggcctgcaggagctcatccccaccacctggtggcct
caccgctccagcaaggaggcccgagagagtaaggaggtgagggacgagacggccgaggag
cggctgcggcggcgtgcctacgagcggggctgccagaggctcaagaaacgcatcgaagtg
gtggaggagctacaggttcagatcctgaagctgctgttggacaacaaggatgacaatggg
ggtgaggcttcgaggtacatcttcctgaccaagttccggaagtttctgcaggagaatgcc
agcagccgggggaacctgcccgtgctctgccctccggagtacatggtctgcttcttgcac
cggctcatctctgccctgcgcttctactgggatgagcacaaggcttccaacccccgcgcc
tccctcagtgaggaggcctacatcccgccccagatcttctataatggcaaggtggactac
tttgacctgcagcgtcttggaggcctcctctcgcatctgcggaagaccctgaaagatgac
cttgcatccaaggccaacattctgattgacccgctggagcttcaggcggccaccatggat
gacctggacgaggacgaggagccggcgccagctgcggcccagcgccccatgcaggccctg
gccatggggggcgcgctgcccctgccccggcctggctggctcagttctccaaccctgggc
cgagccaaccgcttccttagcacagcagccgtgagcctgatgacccctcggcggcccctg
agcacctcggagaaagtgaaggtccgcacgctgagcgcagagcagcggacgcgcgaggac
attgagggtggccactggaacgagggtctgctgctggggaggccccccgaggagcccgag
cagcccctcaccgagaactcgctgctggaagtacttgacggcgccgtcatgatgtacaac
ctcagcgtccaccagcaactgggcaagatggtgggtgtttccgatgacgtaaacgagtac
gccatggctctgagggacacagaggacaagctccgccgctgccccaagcggaggaaggac
atccttgcagagttgaccaagagccagaaggttttctcagaaaaactggaccacctgagt
cgccgtcttgcctgggttcacgccactgtctactctcaggagaagatgctagacatctat
tggctgcttcgtgtctgcctgcggaccattgaacacggcgaccgcacagggtctctcttc
gccttcatgcccgagttctacctgagcgtggccatcaacagctacagcgccctcaagaac
tactttggccccgtgcatagtatggaggagcttccaggctacgaggagactctgacccgc
ctggctgccatcctcgccaaacattttgctgacacccgcatcgtgggcactgacatccgg
gactcgctgatgcaggccctggccagttatgtgtgctacccgcactccctgcgggccgtg
gagcggatccctgaggagcagcgcattgccatggtacggagtcttctggctccctacgag
cagcggccctgggcccagaccaactggatcttggtgcggctctggcggggctgcgggttc
gggtaccgctatacccggctgccacacctgctgaaaaccaaacctgaggacgccaacttg
cctagcctccagaagccctgcccctccacgctgctgcagcagcacatggccgacctgctg
cgccagggccctgacgtggcccccagcttcctcaacagcgtcctcaaccagctcaactgg
gccttttcggagttcatcggcatgatccaggagatacagcaggccgctgagcgcctggag
cggaacttcgtggacagccggcagctcaaggtttgtgccacctgctttgacctctcggtc
agcctgctgcgggtcctggagatgactatcacgctagtgcccgagatattcctggacgcc
acccagcctacatctgagatgctgcttcagcgtcttgcacagctgctgaaccaggtgctg
aatcgggtgacagcagagaggaacctgtttgatcgcgtcgtcactctgcggttgcctggc
ctagagagcgtagaccactaccctatcctggtggcagtgacgggcatcttggtgcggttg
ctggtgcacggcccggcctcagggaaagagcgagccacatcagtgcttctggctgacccc
tgcttccagctgcggtctatttgttacctcctgggacagccggagccccctgcccctgga
actgccctgcctgcccctgaccggaagcgcttctccctgcagagctacacagattacatc
agtgctgaggagctggtgcaagtggaacagatgctgacacacctgacttctgcatctgcc
caggcggcggctgcatccctgcccaccagtgaggaggacctctgccccatctgttatgca
caccccatttctgctgtgttccaaccctgtggccacaagtcctgcaaagcctgcatcaac
cagcacctgatgaacaacaaggactgcttcttctgcaaagccaccatcgtgtctgtagag
gactgggagaaagccaccaacgcaagtgccacttcctcagccacctag
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