Sorex fumeus (smoky shrew): 130037598 Help Entry 130037598         CDS       T10594                                  Symbol PLXND1 Name (RefSeq) plexin-D1   KO K06822   plexin D Organism sfum  Sorex fumeus (smoky shrew) Brite KEGG Orthology (KO) [BR:sfum00001]  09190 Not Included in Pathway or Brite   09193 Unclassified: signaling and cellular processes    99995 Signaling proteins     130037598 (PLXND1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Plexin_cytopl Plexin_RBD TIG Sema PSI TIG_plexin PSI_PlexinA-B TIG_2 Insulin_TMD Cadherin_C_2 Motif Other DBs NCBI-GeneID:  130037598 NCBI-ProteinID:  XP_055985459 LinkDB All DBs Position Unknown AA seq 1931 aa AA seqDB search MARRAAGGAARSARAAPAGPRVRPPPPPPRPPPPALALLLPLLLGAARAGALEIQRRFPS PTPTNNFALDGAAGTVYLAAVNRLYQLSGANLSLEAEAAVGPVADSPLCHAPQLPQASCE HPRRLTDNYNKILQLDPGQGLVVVCGSIYQGFCQLRRRGNISAVAVRFPPAAPPAEPVTV FPSMLNVAANHPNASTVGLVLPAGAGAGGSRLLVGATYTGYGSAFFPRNRTLEDHRFENT PEIAIRSLDARGDLAKLFTFDLNPSDDNILKIKQGAKGQHKLGFVRAFLHPPAPPPPAAP SYAYLALTSEARAGDKESQARSLLARICLPRGAGGDAKKLTESYIQLGLQCAGGAGRGDL YSRLVSVFPTRDRLFAVFERPQGAPAARAAPAALCAFRFADVQAAIRAARTACFVEPAPD VVAVLDSVVQGTGPACERKRNIQLQPEQLDCGAAHLQHPLSVLQPLKATPVFRAPGLSSV AVASVSNYTVVFLGTVSGRLLKINLNESMQVASRRALTVAYGEPVHHVMQFDPTDPSYLY LMTSHQMARVSVAACALHATCADCVGAADAYCGWCTLETRCTLQRDCANASLPHFWTSAS EGPGRCPSMAVLPAEIDVRQEYPGMILQLSGSLPDLSGAEMACDYGGSIRTVARVPGPAF GHQLAYCDLLPRNQFPPFPPHQDHVTVEVSVRVGGHSIVSANFSIYDCGRTGQVYPHTAC SSCLSAPWPCFWCTQQHACVSNQSRCESSPNPTSPQDCPQSLPTPLAPVPTGGSRSIEVP VANAAFFQGTPLDCSFGPQEVFEAVWVNQTAVRCDQVVLHTNQKSQVFPLRLQLKGQPAR FLDSPDPMTVEVYNCAMGSPDCSQCLGREDLGHLCVWSDGCRLRGAQQPLPDSCPAPEIR TIEPLSGPLDGGTLLTIRGKNLGRRLSDVAHGVWIGSVACEPLADRYTVSEGIVCATGPA PGPFSDVVVVNVTKEGRSRQRFSYVLPLVHSLEPAMGPKAGGTRITIRGSHLHVGSELQV LLNDTEPCTELVRSDSSITCTVPGGALPAPVPVCVRFEQRGCVPGNLTFWYMRNPVITAI NPHRSPVSGGRTITVAGERFHMVQNVSMAVHHIGREPTLCKVLNSTVLTCPSPGALSNDS APVDFFINGRAYADEVAAAEELLDPEEMPRSSPFRLDYLPDPQFSTAKRERWIRHHPGEP LTLVIHKEQDSLGLESHEYRVRIGQVACDIQIVSDRVLHCSVNESLGTAEGQLPITVQVG NFNQTIATLQLGGSETAIIVSIVICSVLLLLSVVALFVFCTKSRRAERYWQKTLLQMEEM ESQIREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLNEERYVLP SQTLNSQGSAPVQETHPLLGEWRVPESCRPHMEEGIGLFSSLLNNKHFLIVFVHALEQQK DFAVRDRCSLASLLTIALHGKLEYYTGIMKELLVDLIDASAAKNPKLMLRRTESVVEKML TNWMSICMYSCLRETVGEPFFLLLCAIKQQVNKGSIDAITGKARYTLNEEWLLRENIEAK PRNLNVSFQGCGMDSLSVRAMDTDTLTQVKEKILEAFCKNVPYSQWPRAEDVDLEWFASS TQSYILRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKKDNTRGRVKDLDTEKYF HLVLPTDELAEPKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIREDKPP LAVKYFFDFLEEQAEKRGISDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIDKTDHMDAC LSVIAQAFIDACSISDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIHDMTPLSEQEMN AHLAEESRKYQNEFNTSVAMTEIYKYAKRYRPQIMAALEANPTARRTQLQHKFEQVVALM EDNIYECYSEA NT seq 5796 nt NT seq  +upstreamnt  +downstreamnt atggctcgtcgcgccgcgggcggcgcagcccgtagcgcccgggcggccccggccgggccg cgggtccggccgccgccgccgccgcctcggccgccgccgcccgcgctggcgctgctgctg ccgctgctgctgggcgcggcgcgcgccggggcgctggagatccagcggcgcttcccgtcg cccacgcccaccaacaacttcgccctggacggcgcggccggcaccgtgtacctggcggcc gtgaaccgcctgtaccagctgtcgggcgccaacctgagcctggaggccgaggcggccgtg ggccccgtggccgacagcccgctgtgccacgcgccgcagctgccccaggcctcgtgcgag cacccgcggcgcctcaccgacaactacaacaagatcctgcagctggacccgggccagggc ctggtggtcgtgtgcggctccatctaccagggcttctgccagctgcggcgccgcggcaac atctcggccgtggccgtgcgcttcccgcccgccgcgccgcccgccgagccggtcaccgtg ttccccagcatgctgaacgtggccgccaaccacccgaacgcgtccaccgtggggctggtg ctgcccgcgggcgcgggcgcgggcggcagccgcctgctcgtgggcgccacgtacacgggc tacggcagcgccttcttcccgcgcaaccgcacgctggaggaccaccgcttcgagaacacg cccgagatcgccatccgctcgctggacgcgcgcggcgacctggccaagctcttcaccttc gacctcaacccgtccgacgacaacatcctcaagatcaagcagggcgccaagggccagcac aagctgggcttcgtgcgcgccttcctgcacccgcccgcgccgccgccgccggccgcgccg tcctacgcctacctggcgctcaccagcgaggcgcgcgccggcgacaaggagagccaggcg cggagcctgctggcgcgcatctgcctgccccgcggcgcgggcggcgacgccaagaagctc accgagtcctacatccagctgggcctgcagtgcgcgggcggcgcgggccgcggcgacctc tacagccgcctggtgtccgtcttccccacgcgcgaccggctcttcgccgtcttcgagcgg ccccagggcgcgcccgccgcgcgcgccgcgcccgccgcgctctgcgccttccgcttcgcc gacgtgcaggccgcgatccgcgccgcgcgcaccgcctgcttcgtggagcccgcgcccgac gtggtggccgtgctggacagcgtggtgcagggcaccgggccggcgtgcgagcgcaagcgc aacatccagctgcaaccggagcagctggactgcggggcggcccacctgcagcaccccctc tccgtcctgcagcccctcaaggccacgcccgtcttccgcgcgcccggactctcctccgtg gccgtggccagcgtgagcaactacacggtggtcttcctgggcaccgtcagtggacggctg ctcaagatcaacctgaacgagagcatgcaggtggcgagcaggcgggcactgaccgtggcc tacggggagcctgtgcaccatgtgatgcagttcgaccccacggaccccagttacctttac ctgatgacgtcccaccagatggcccgagtgagcgtggccgcctgcgccctgcacgccacc tgcgcggactgcgtgggagccgccgacgcctactgcggctggtgcaccctggagacacga tgcacactgcagcgcgactgcgccaatgccagcctgccgcacttctggaccagcgccagc gagggcccgggccgctgcccctccatggctgtgctgcccgctgagattgacgtgcgccag gagtacccgggcatgatcctgcagctgtcggggagtctgccggacctgagtggtgcggag atggcgtgtgactatgggggcagcatccgcacggtggcccgtgtccccggccccgccttc ggccaccagctggcctactgcgacctcctgccccggaaccagttcccgcccttcccgccc caccaggaccacgtgaccgtggaggtgtccgtgcgggtcggcgggcacagcattgtgagt gccaacttcagcatctacgactgcggccgcaccgggcaggtgtacccacacacggcctgc agcagctgcctgtcggcaccttggccctgcttctggtgcacccagcagcacgcctgcgtc tccaaccagtcgcggtgcgagagctccccaaaccccacgagccctcaggactgtccccag agcctgcccaccccactggcccccgtgcccacgggcggctcccggagcatcgaggtgccc gtggccaacgccgccttcttccagggcacacccctcgactgcagcttcgggcctcaggag gtcttcgaggccgtttgggtgaatcagacggccgtgcgctgcgaccaagtggtgctccac accaaccagaagagccaggtgtttccactccgtctgcagctaaaggggcagccggcccgc ttcctggacagccctgaccccatgacagttgaggtctacaactgcgccatgggcagcccc gactgctcccagtgcctgggccgagaggacctgggccacctgtgtgtgtggagtgacggc tgccgcctgcggggggcccagcagcccctgcccgacagctgcccggcccccgagatccgc acgatcgagcccctgagtggccctctggacggtggcacactgctgaccatccgtggcaag aacctgggccggcggctgagtgacgtggcccacggcgtgtggataggcagcgtggcctgc gagccgctggccgacagatacactgtgtcggaggggattgtgtgtgccacgggaccggcc ccagggcccttctcggacgtcgtggtggtgaacgtgaccaaggagggcaggtcccggcag cggttctcctacgtgctgcccctagtccactccctggagcctgccatgggccccaaggcg gggggcacccggatcaccattcgcgggagtcacctgcacgtgggctcagagctccaggtc ctgctgaacgacacagagccctgcacggaactcgtgcgctcagacagcagcatcacctgc acggtgccagggggcgccctgcccgcccccgtacctgtgtgtgtgcgctttgagcagcgg ggctgtgtgcccggcaacctgaccttctggtacatgcggaatccggtcatcacggccatc aacccccaccgcagtcccgtcagcggtgggaggaccatcacggtggccggggagcgcttc cacatggtgcagaacgtgtccatggccgtgcaccacatcggccgggagcccacgctctgc aaggttctcaactccactgtcctcacctgcccgtcccccggggccctgagcaatgactca gcacctgtggacttcttcatcaacgggcgggcctacgccgacgaggtggccgcggccgag gaactgctggaccccgaggagatgccgcggagcagcccgttccgcctggactacctcccc gacccccagttctccacagccaagcgggagcggtggatccggcaccaccccggggagccc ctcaccctggtcatccataaggagcaggacagcctggggctcgagagccacgagtaccgt gtgaggatcgggcaggtggcctgcgacatccagatcgtctccgacagggtgctgcactgc tccgtcaacgagtctctgggcaccgccgagggccagctgcccatcacggtccaggtgggc aacttcaaccagaccattgccacgctgcagctgggggggagcgagacggccatcatcgtg tccatcgtcatctgcagcgtcctgctgctgctgtccgtggtcgctctgttcgtcttttgc accaagagccgccgcgccgagcgctactggcagaagacgctgctgcagatggaggagatg gagtcgcagatccgcgaggaaatccggaaaggttttgccgagctgcagacggacatgacg gacctgaccaaggagctgaaccgtagccagggcatccccttcctggagtacaagcacttt gtgacacgcaccttctttcccaagtgctcctccctcaacgaagagcgctacgtcctaccc tcccagaccctcaactctcagggcagtgcccccgtgcaggagacccacccgctgctgggg gagtggagggtccccgagagctgccggccgcatatggaggagggcatcggcctcttctcg tctctgctcaacaataagcacttcctcatcgtctttgtgcacgcgctggagcagcagaag gacttcgccgtgcgcgacaggtgcagcctggcatcgctgctgaccatcgcgctgcacggc aagctggaatactacacaggcatcatgaaggagctgctggtcgacctcatcgacgcttcg gctgccaagaaccccaagctcatgctgcggcgcaccgagtcggtggtggagaagatgctg accaactggatgtccatctgcatgtacagctgcctgagggagacggttggggagcccttc ttcctgctcctgtgcgccatcaagcagcaggtcaacaagggctccatcgacgccatcacc ggcaaggcccgctacaccctcaacgaggagtggctgctgcgggagaacatcgaggccaag ccccggaacctgaacgtgtccttccagggctgtggcatggactcgctgagcgtgcgggcc atggacactgacacgctgacccaggtgaaggagaagattctagaagccttctgcaagaac gtcccctactcgcagtggccacgcgccgaggacgtcgacctggagtggtttgcctccagc acccagagctacatcctgcgggacctggacgacacttcggtggttgaggatggtcgcaag aaactcaacacactggcccactacaagatccctgaaggcgcctccctggccatgagcctc acggacaagaaggacaacacccggggcagagtgaaagacttggacacggagaagtatttc catctggtgctgcccacggatgagctggcggagcccaagaagtcgcaccggcagagccac cgcaagaaggtcctccccgagatctacctgacgcgcctgctgtccaccaagggcacgctg cagaagtttctggacgacctgtttaaggccatcctgagtatccgtgaggacaagcccccg ctggccgtcaagtatttcttcgacttcctggaggaacaggccgagaagaggggcatctcg gacccagacacgctgcacatctggaagaccaacagcctcccactccggttctgggtgaac atcctgaagaacccccagttcgtcttcgacatcgacaagacggaccacatggacgcctgc ctgtcggtcatcgcccaggccttcatcgacgcctgctccatctccgacctccaactgggc aaggactcacccaccaacaagctcctgtacgccaaggagatccccgagtaccgcaagatc gtgcagcgctactacaagcagatccacgacatgacgccgctcagcgagcaggagatgaac gcgcatctggccgaggagtcccggaaataccagaacgagttcaacaccagcgtggccatg accgagatctacaaatacgccaagaggtaccgccctcagatcatggccgccctggaggcc aaccccacggcccggaggacgcagctgcagcacaagttcgagcaggtggtggccctgatg gaggacaacatctacgagtgctacagcgaggcctga

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