Sorex fumeus (smoky shrew): 130038581
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Entry
130038581 CDS
T10594
Symbol
LGI1
Name
(RefSeq) leucine-rich glioma-inactivated protein 1
KO
K25428
leucine-rich repeat LGI family member 1
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
130038581 (LGI1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_9
LRRCT
LRR_14
DUF7448
VWC2L_1st
Motif
Other DBs
NCBI-GeneID:
130038581
NCBI-ProteinID:
XP_055986387
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MQVDSLLQQLDPSHLTAPHRSLPRAVHCWSEEQLTNQLQVPVLKSRYTEAKEKGGLLCDL
VLEQDNHHLNSRSPVHVWGYFFGCMESERSQRMGNACIPLKRIAYFLCLLSALLLTEGKK
PAKPKCPAVCTCTKDNALCENARSIPRTVPPDVISLSFVRSGFTEISEGSFLFTPSLQLL
LFTSNSFDVISDDAFIGLPHLEYLFIENNNIKTISRHTFRGLKSLIHLSLANNNLQTLPK
DIFKGLDSLTNVDLRGNSFNCDCKLKWLVEWLSHTNATVEDIYCEGPPEYKKRKINSLSP
KDFDCIITEFAKSQDLPYQSLSIDTFSYMNDEYVVIAQPFTGKCIFLEWDHVEKTFRNYD
NITGTSTVVCKPIVIETQLYVIVAQLFGGSHIYKRDSFANKFIKIQDIEILKIRKPNDIE
TFKIENNWYFVVADSSKAGFTTIYKWNGNGFYSHQSLHAWYRDTDVEYLEIARPPQTLRM
PHLILSSSSQRPVIYQWNKATQLFTNQTDIPNMEDVYAVKHFSVKGDVYICLTRFIGDSK
VMKWGGSSFQDIQRMPSRGSMVFQPLQINNYQYAILGSDYSFTQVYNWDAEKAKFVKFQE
LNVQAPRSFTHVSINKRNFLFASSFKGNTQIYKHVIVDLSA
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtcgactctctcctccagcagttggatccctcccatctcacagcacctcacagg
tctcttccccgagcagtgcattgctggagcgaggagcagctcacgaatcagctgcaggtc
cctgttttgaaaagcagatatacagaggcaaaggaaaagggtggactcctctgtgacctg
gtcttagagcaagataatcaccatctgaattccagaagccctgttcatgtttggggatat
tttttcggctgcatggaatcagagagaagccaaaggatgggaaatgcctgcatccccctg
aaaagaattgcttatttcctatgtctcttatctgcgcttttgctgactgaggggaagaaa
ccagcgaagccaaaatgccctgccgtgtgtacttgtaccaaagataatgctttatgtgag
aatgccagatccattccacgcaccgttcctcctgatgttatctcattatcctttgtgaga
tctggttttactgaaatctccgaagggagttttttattcacaccatcgctgcagctcttg
ttattcacatcgaactcctttgatgtgatcagtgatgatgcttttattggtcttccacat
ctagagtatttatttattgaaaacaacaacatcaagaccatttccagacatactttccgg
ggattaaagtctttaattcacctgagcctcgcaaacaacaatctgcagacacttccaaaa
gacattttcaaaggcctggattctttaacaaatgtggacctaagagggaattcatttaat
tgtgactgtaaactgaagtggctggtggaatggttaagccataccaatgcaactgtcgaa
gacatctattgtgaaggtcctccagaatacaaaaaacgaaaaatcaatagcctctctccc
aaggattttgattgcatcattacagaatttgcaaagtctcaagacctgccttatcaatca
ctgtccatagatactttttcttatatgaatgatgagtatgtagtcattgctcagcctttt
actggaaagtgcattttccttgaatgggaccatgtagaaaagaccttccggaattatgac
aacattacaggcacgtccactgtagtgtgcaagcctatagtcattgaaactcaactctat
gttattgtggcccagctgtttggaggttctcacatctataagcgagacagttttgcaaac
aaattcataaaaatccaagatattgaaattctcaaaatccgaaaacccaatgacattgaa
acattcaagatcgaaaacaactggtactttgttgttgctgacagttcaaaagctggtttt
accaccatttacaaatggaacggaaatggattctactcccaccagtccttacatgcatgg
tacagggacaccgatgtggaatatctagaaatagccagaccaccgcagacactcaggatg
cctcatttaatcctgtctagtagctcccaacgtcctgtaatttatcagtggaacaaagca
acacaattattcactaaccaaaccgacatccctaacatggaggacgtatatgctgtaaag
cacttctcagtaaaaggtgatgtgtacatttgcttgacaagattcattggcgattccaaa
gtaatgaaatggggaggctcctcatttcaagatattcagaggatgccatcaagaggatcc
atggtgtttcagcctctgcagataaataactaccaatatgcaattcttggaagtgattat
tcctttactcaagtgtataactgggatgcagagaaagccaaatttgtgaaatttcaggaa
ttaaatgttcaggcaccgagatcattcacccatgtgtctattaataagcgtaattttctt
tttgcttccagttttaagggaaatacacagatttacaaacatgtcattgttgacctaagc
gcatga
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