Sorex fumeus (smoky shrew): 130040009
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Entry
130040009 CDS
T10594
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130040009 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130040009 (KDM2A)
04121 Ubiquitin system [BR:
sfum04121
]
130040009 (KDM2A)
03036 Chromosome and associated proteins [BR:
sfum03036
]
130040009 (KDM2A)
Enzymes [BR:
sfum01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
130040009 (KDM2A)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
130040009 (KDM2A)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130040009 (KDM2A)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
130040009 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
130040009 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
130040009
NCBI-ProteinID:
XP_055988000
LinkDB
All DBs
Position
Unknown
AA seq
1162 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLN
MDLELNGLDSGNGDEEALDRETRRLSSRRSVLTSPIANGVNLDYDGMGKTCRSLPTLKKS
MSGDSPSDSSRGSHNGQVWDPQCSPRKDKQVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEDLANSDPKLALTGVPIVQWPKRDKLKFPARPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDSSEKTQKRKMEESDEESVQAKVLRPLRSCDEPLTPPPHSPT
AMLQLIHDPVSPRAVVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNP
SGRKELSEVDKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHTPRVLVQHC
PARTPQRGDEEGLGGEEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMS
VFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLS
WTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIR
DLLTPPTDKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQ
SSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHF
ISDLSINSLYCLSDEKLIQKIS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgaagaagaaagaattcgttacagccagagattgcgtggtaccatgaggcgg
cgctatgaagatgatggtatctcagatgatgaaattgaagggaaaaggacttttgacctg
gaagagaaactccacaccaacaaatacaatgcaaattttgttacttttatggagggaaaa
gattttaatgtagaatatatccagcgaggtggcttaagagatcctctgattttcaagaac
tctgatggacttggaataaagatgccagatccagacttcactgtgaatgacgtcaaaatg
tgtgtggggagtcgccgcatggtggatgtcatggatgtgaacacacagaaaggcattgaa
atgaccatggctcaatggacacgctactatgagactccggaggaggagcgagaaaaactc
tataatgtcatcagcctagagtttagccacaccaggctggagaacatggtgcaaagaccc
tcaacggtggatttcattgactgggtagacaacatgtggccaagacatttgaaggaaagc
cagacggaatcaaccaatgccatcttggagatgcagtatcctaaagtgcagaagtactgt
ttaatgagtgttcgaggctgctatactgacttccatgtggacttcggtggtacctctgtt
tggtatcacatccaccaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtgtcagattgtcagcgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtacactccaacagatacattagtgtttggaggcaattttttg
catagtttcaatatccctatgcagttaaaaatatacaacattgaagatcggacacgggtt
ccaaataagttccgatatccgttctactatgagatgtgttggtacgtgttggagcgctat
gtttactgcataaccaaccgctcccacctaactaaggaatttcagaaagagtcccttaac
atggatttggagttaaacggcctggactctggaaacggggatgaggaggccttggatcga
gaaacacggcgcttgagcagtagacgttccgttctcactagccctatagccaatggcgtc
aacctggattatgatgggatgggcaagacgtgccgaagtcttccgacgctgaagaaaagc
atgtctggggactcgccctcagactccagccgaggttcccacaatggccaagtgtgggat
ccacagtgtagcccccgcaaggacaagcaggtgcacctaacccattttgagcttgaaggc
cttcgctgccttgtagataagttggagtctctgccactgcataagaaatgtgtccccacg
ggcatagaagacgaagatgccctcattgctgatgtcaagattttgctggaggaccttgcc
aacagcgatcccaagttagccctcactggagtcccgatagtacagtggccaaagagggat
aagcttaaattccctgcccggccaaaggtgcgggttcccaccatccccatcacaaagcct
cacactatgaaaccagccccacggttaacacccgtgagaccagctgctgcctcccccatc
gtatcaggagccaggcggagacgagtgcggtgtcgaaaatgcaaggcctgcgtgcaagga
gaatgtggtgtttgtcactactgcagagacatgaagaagtttggggggcctggtcgaatg
aagcagtcctgtgtcctccggcagtgcttggcacccagactgcctcactcagtcacatgt
tccctctgtggagaagtagatcaaaatgaggaaacacaggattttgagaagaagctcatg
gaatgttgtatctgcaatgaaattgtgcatcccggctgcctccagatggatggagagggc
ctgcttaatgaggaattgccaaattgctgggagtgtccaaagtgctaccaggaggacagc
tcagaaaaaacccagaagcggaagatggaggagagcgatgaagagtccgtgcaggccaag
gtgctgcggcccctgcggagctgcgacgagccgctcacgcccccgcctcactcgcccacc
gccatgctacagctcatccacgacccggtgtccccccgggccgtggtgactcggtcctcc
cctggggccggccccagcgaccaccacagtgccagccgtgacgagcgcttcaagcggcgg
cagttgctgcggctgcaggccaccgagcgcaccatggtacgggaaaaggagaacaacccc
agcggcagaaaggagctgtctgaagttgacaaagccaagatccggggatcgtacctcact
gtcacgctgcagaggcccaccaaagagctccacgggacctccattgtgcccaagctgcag
gccatcacggcctcctctgccaaccttcgccataccccccgtgtgctagtacagcactgc
ccagcccggaccccccagcgcggggacgaggaggggctggggggagaggaggaggaagag
gaggaggaggaggaggaagatgacagtgcagaggaggggggtgcggccaggctgaatggc
cggggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtctggatgtct
gtcttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacgtgg
tataaatggtgctgcgacaaaagactttggacaaaaattgacttgagtaggtgtaaggct
atcgtgccccaggctctcagtggcatcatcaagagacagcctgttagccttgacctcagt
tggaccaacatctccaaaaagcaactgacatggcttgtcaatcggctgccagggctgaaa
gacctcctcctagcgggctgttcctggtcagcagtctctgccctcagcacctccagctgc
ccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggacccccaaattcgg
gacttgctgactccaccaactgataaaccgggtcaggacaatcgcagtaagctccggaac
atgactgacttccggctggcaggccttgacatcacagatgccacgcttcgcctcatcatc
cgccatatgccccttctgtctcgactcgacctcagtcactgcagccacctcacagatcag
tcctccaatctgctcacggctgtcgggtcttccacacgttactccctcacagagctcaac
atggcaggttgcaataaactgacagaccagaccctaatctacctacggcgcatcgccaac
gtcaccttgatcgaccttcgcggatgcaagcagatcactcggaaagcctgcgagcacttc
atctcagacttgtccatcaacagtctctactgcctgtctgacgagaagctgatacagaag
atcagctaa
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