Sorex fumeus (smoky shrew): 130041481
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Entry
130041481 CDS
T10594
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum02010
ABC transporters
sfum04146
Peroxisome
sfum04977
Vitamin digestion and absorption
sfum04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130041481 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
130041481 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
130041481 (ABCD4)
04980 Cobalamin transport and metabolism
130041481 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130041481 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfum02000
]
130041481 (ABCD4)
Enzymes [BR:
sfum01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
130041481 (ABCD4)
Membrane trafficking [BR:
sfum04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
130041481 (ABCD4)
Transporters [BR:
sfum02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
130041481 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
AAA_30
AAA_22
IRK
AAA_29
AAA_23
NACHT
nSTAND3
AAA_7
T2SSE
Motif
Other DBs
NCBI-GeneID:
130041481
NCBI-ProteinID:
XP_055989640
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MAVPRSAPRAGARPRLDLQFLQRFLQIQRVLFPSWSSQTALMFLTLLCVALLEQLVVYQV
GLIPSQYYGVLGSKDLAGFKSLTLLAVLLIVLNSMLKSFDQFTCNLLYVSWRKDLTEHLH
RLYFRGRVYYTLNVLRDDIDNPDQRISQDVERFCRQLSSVASKLLISPFTLVYYTYQCFQ
STGWLGPVSIFGYFILGTIVNKMLMGPIVAKLVQQEKLEGDFRFKHMQIRVNAEPAAFYR
AGHVEHMRTNRRLQTLLQTQRQLMTKELWLYIGINTFDYLGSILSYVVIAIPIFSGVYGD
LSPTQLSTLVSKNAFVCIYLISCFTQLIDLSTTLSDVAGYTHRIGELQETLLAMSHKSQD
DEIPDESEWDFDGARPGTEPADTAFLLERVCISAPSSDRPFIRDLSLKVSEGQSLLITGN
TGTGKTSLLRVLGGLWASSRGSVQMLTDFGPRGVLFLPQKPFFTDGTLREQVIYPLKEIY
PDSGSIDDERIMRFLELAGLSSLVARTEGLDQPVDWNWYDVLSPGEMQRLSFARLFYLQP
KYAVLDEATSALTEEAESELYRVGQQLGMTFISVGHRRSLEKFHSLCLKLCGEGRWELSR
IKVE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgccgcggtccgcgccccgggctggtgccaggccccggttggatctgcagttt
ctccagcggttcctgcagattcagagggtcttgtttccctcttggtcatcccagactgcc
ttgatgttcctgacccttttgtgtgtggccctgctggaacaactggtggtctaccaggtg
ggcctgatccccagccagtactacggggtcctgggaagcaaagacctggcagggtttaag
agcctgacgctcctggccgtcttgctcatcgtcctcaactccatgctgaagagctttgac
cagttcacctgcaacctgctgtacgtgagctggaggaaggacctcaccgagcacctccac
cgcctctacttccggggccgcgtctactacaccctcaacgtcctgcgggatgacatcgat
aacccggaccagcgcatcagccaggatgtagagcggttctgccggcagctgagcagcgtg
gccagcaagctgctcatctcccccttcaccctggtctactacacctaccagtgcttccag
agcaccggctggctggggcctgtgagtatcttcggctatttcatcctgggaaccatcgtg
aacaaaatgttgatgggacccatcgtggccaagctggtccagcaggagaagctggagggg
gatttccggttcaagcacatgcagatccgcgtgaatgccgagcctgctgcattctacaga
gccgggcacgtggagcacatgaggaccaaccgcaggctgcagacgctgctgcagacccag
aggcagctgatgaccaaggagctctggctgtacattggcatcaacaccttcgactacctg
ggcagcatcctgagttacgtggtgatcgccatccccattttcagtggtgtctacggagac
ctgagccccacccagctcagcaccctggtcagcaagaacgcctttgtgtgcatctacctc
atcagctgcttcacccagctcatcgacctgtccaccacgctctcagacgtggccgggtac
acacacaggatcggggagctccaggagaccctgctggccatgtcgcataaatcgcaggat
gacgagatcccggatgaaagcgagtgggactttgatggggcccggcccggcacagagcca
gcagacaccgccttcctcctggagcgcgtctgcatctccgccccttcctcggaccggccg
ttcatccgggacctgagcctgaaggtctccgagggccagagcctgctcatcacggggaac
acgggcaccggcaagacatccctgctgcgcgtgctgggtggcctctgggccagctcccgg
gggtcggtgcagatgctgacggacttcgggccccggggggtgctgttcctaccccagaaa
cccttcttcaccgacgggaccctccgggagcaggtgatctacccgctgaaggagatctac
cctgactcgggttccattgatgacgagaggatcatgaggttcttagagttggcaggtctg
tccagcttggtggccaggacggagggtctggaccagccggtcgactggaactggtacgat
gttctgtcccctggggagatgcagcgactgtcctttgcccggctgttctaccttcagccc
aagtacgcagtgctggacgaagccaccagcgcgctcacggaggaagcggagagtgagctt
taccgtgtcggccagcagctgggcatgacgttcatcagcgtgggccaccggcgcagcctg
gagaagttccactctttgtgtctgaaactctgtggagaaggaaggtgggaactgagcaga
atcaaagtggagtaa
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integrated database retrieval system
