Sorex fumeus (smoky shrew): 130041584
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Entry
130041584 CDS
T10594
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04015
Rap1 signaling pathway
sfum04115
p53 signaling pathway
sfum04145
Phagosome
sfum04148
Efferocytosis
sfum04151
PI3K-Akt signaling pathway
sfum04350
TGF-beta signaling pathway
sfum04510
Focal adhesion
sfum04512
ECM-receptor interaction
sfum04820
Cytoskeleton in muscle cells
sfum05144
Malaria
sfum05165
Human papillomavirus infection
sfum05205
Proteoglycans in cancer
sfum05206
MicroRNAs in cancer
sfum05219
Bladder cancer
Brite
Membrane trafficking [BR:
sfum04131
]
Endocytosis
Phagocytosis
Opsonins
130041584 (THBS1)
Glycosaminoglycan binding proteins [BR:
sfum00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130041584 (THBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130041584
NCBI-ProteinID:
XP_055989821
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All DBs
Position
Unknown
AA seq
1166 aa
AA seq
DB search
MGLAWALGVLFLGHVCASNHIPESSTDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR
IEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLALERKDRSGQLFSVV
SNGKAGTLDLSLNLQGKQRVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMESAELD
VPIQRIFTRDLASIARLRIAKGDVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTSPVL
TLDNNVVNGSSPAIRTDYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRK
VSEENKQLRRSPHCYHNGVQYKNHEEWTVDSCTECHCQDSVTICKKVSCPIMPCSNATVP
DGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQTRTCH
LQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPTPQMNGKPCEGEARETKAC
KKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPPPQFGGKDCIGDVTENQICNKQ
DCPIDGCLSNPCFAGTKCTSYPDGSWKCGACPAGYSGNGIQCRDVDECKEVPDACFNHNG
EHRCKNTDPGYNCLPCPPRFSGPQPFGRGVEHATANKQVCKPRNPCTDGTHDCNKNAKCN
YLGHYSDPMFRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPNLPNS
GQEDYDKDGIGDACDDDDDNDRVPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYNHNPD
QADTDKNGEGDACAVDIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEHNPDQ
LDSDSDLIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDNDGIP
DDKDNCRLVPNPDQKDSDGDGRGDACKDDFDHDSVPDIDDICPENVDISETDFRRFQMIP
LDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERDDDYAG
FVFGYQSSSRFYVVMWKQITQTYWDTHPTKAQGYSGLSVKVVNSTTGPGEHLRNALWHTG
NTPGQVRTLWHDPRNIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYDKTYA
GGRLGLFVFSQEMVFFSDLKYECRDS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggggctggcctgggcactcggtgtcctattcctggggcacgtgtgtgcctccaaccac
attccagagtcaagcacagacaacagcgtgtttgacatctttgaactcactggggctgcc
cgcaagggttctgggcgccggctggtgaagggccccgatccttcaagccccgctttccgc
atcgaagatgccaacctgattccccccgtacctgacgacaagttccaagacctggtggac
gccgtgcgggctgagaagggcttcctcctcctggcctccctgcggcagatgaagaagacc
cgaggcacgctgctggccctcgagcgcaaagaccgctccggccagctcttcagcgtggtg
tccaatggcaaggcaggcacgctggacctgagcctgaacctgcagggcaaacagcgtgtg
gtgtctgtggaggaagcactcctggccacaggccagtggaagagcatcaccctgtttgtg
caggaggacagagcccagctctacatcgactgcgagaagatggagagtgctgagcttgat
gtccccatccagaggatcttcaccagggacctggcgagcatcgccagactgcgcattgca
aagggagacgtcaatgataacttccagggggtgctgcagaacgtgcggtttgtctttgga
accacaccagaagatatcctcaggaacaaaggctgttcgagctctaccagtcctgttctt
accctcgacaataatgtggtgaatgggtccagtcctgccatccgtactgactacattggc
cataagaccaaggacctgcaggccatctgtggcatttcttgtgatgagctgtctagcatg
gtcctggagctccggggcctccgcaccattgtcaccacgcttcaggacagcatccgcaaa
gtgtctgaagagaacaaacagctgaggaggtcccctcactgctaccacaatggagtccag
tacaagaaccacgaggagtggacagttgacagctgcacagagtgtcactgtcaggactct
gttaccatctgcaaaaaggtctcctgccccattatgccctgttccaatgccactgttcct
gatggagaatgctgcccacggtgttggcccagtgactcggcagatgacggctggtcccca
tggtctgagtggacctcctgctcggtgacatgtggcaacggaatccagcagcgtggccgc
tcctgcgacagcctcaacaacagatgcgagggctcctctgtccagacgcggacctgccac
cttcaggagtgtgacaagagatttaaacaggatggcggctggagccactggtccccatgg
tcttcctgctctgtgacctgtggtgatggtgtgatcaccaggatccggctctgcaactct
cccactccccagatgaatggcaaaccatgtgaaggcgaagctcgggagaccaaagcctgc
aagaaagatgcctgccccataaatggaggctggggtccctggtctccgtgggacatctgt
tctgtcacctgtggaggaggagtgcagaaacgtagcaggctctgcaacaaccccccaccc
caatttggaggcaaggactgcattggagatgtgaccgagaaccagatctgcaacaagcaa
gactgtccaatcgatgggtgtctgtccaacccctgctttgcgggcaccaagtgtaccagc
taccccgatggcagctggaaatgcggtgcgtgtcccgcaggttacagtggaaatggaatt
cagtgcagagacgtggatgagtgcaaagaagtgccagatgcctgcttcaaccacaacgga
gagcacaggtgtaagaacacagaccctggttacaactgcctgccctgcccaccacgcttc
tctgggccccagccctttggccggggtgtggaacatgccactgctaacaaacaggtgtgc
aagccccgcaacccctgcacagacggcacccatgactgcaacaagaatgccaagtgcaac
tacctgggacattacagtgatcccatgttccgctgtgagtgcaagcctggctatgcaggc
aatggcatcatctgcggagaggacacagacctggatggctggcccaatgaggacctggtg
tgtgtggccaatgccacctaccactgcaaaaaggataactgccccaaccttcccaactca
ggacaggaggactatgacaaagatggaatcggcgatgcctgtgatgatgatgatgacaat
gacagggttccagacgatagggacaattgtccattccattacaaccccgcccagtatgac
tatgacagagatgatgtgggagaccgctgtgacaactgcccctacaaccacaatccagac
caggcagacaccgacaagaacggggaaggagacgcctgtgctgtggatattgacggggat
ggtatcctcaatgagcgtgacaactgccagtatgtctacaatgtggaccagagggacacc
gacatggacggtgttggagatcagtgtgacaactgtcccctggaacacaacccagatcag
ctcgactctgactcagatctcattggtgacacctgtgacaacaatcaggacattgacgaa
gatggccaccagaacaatctggataactgcccctatgtgcccaatgccaaccaggctgac
catgacaaagatggcaagggagatgcctgtgatcatgatgacgataatgatggcattcct
gatgacaaggacaactgcaggctggtgcccaatcccgaccagaaagactctgatggtgat
ggtcgaggggatgcttgcaaagatgactttgaccatgacagtgtgccagacattgatgac
atctgtcctgaaaatgttgatatcagtgagactgatttccgccgattccagatgattcct
ctagatcccaaagggacatcccaaaatgaccctaactgggttgtacgtcatcagggtaaa
gagctcgtccagactgtcaactgtgatcctggacttgctgtaggctatgatgagttcaac
gccgtggactttagtggcactttcttcattaacaccgagcgggatgatgactatgccgga
tttgtcttcggctaccagtccagcagccgcttctatgttgtgatgtggaagcaaatcaca
cagacctattgggacacccaccccacaaaggctcagggctactcgggtctttctgtgaaa
gtcgtgaactccaccacggggcctggcgagcacctgcggaatgccctgtggcacacaggc
aatacccctggtcaggtgcgcaccctgtggcatgacccccgtaacattggctggaaggat
ttcactgcctaccgatggcgtctgagccacaggccaaagacaggtttcatcagagtggta
atgtatgaggggaagaaaatcatggctgactcaggacccatctatgacaaaacctatgct
ggtggtagactcgggttgtttgtcttctctcaagaaatggttttcttctctgacctgaaa
tacgaatgcagagattcctaa
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integrated database retrieval system
