Sorex fumeus (smoky shrew): 130042505
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Entry
130042505 CDS
T10594
Symbol
PHC1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130042505 (PHC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfum03036
]
130042505 (PHC1)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
130042505 (PHC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHC2_SAM_assoc
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
zf-FCS
zf-CGNR
Motif
Other DBs
NCBI-GeneID:
130042505
NCBI-ProteinID:
XP_055990656
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MGVESESWGPWTAIMETESEQTSSSANGSSGSGANSRPQIAQMSLYERQAVQALQALQRQ
PNAAQYFHQFMLQQQLSNAQLHSLAAVQQATIAASRQASSPNAGSTQQQTATTQASINLA
TTSAAQLISRSQSVSSPTATTLTQSVLLGNPTSPPLNQSQAQMYLRPQLGNLLQVNRTLG
RNVPLASQLILMPNGAVAAVQQEVPSAPSPGAHADADQVQNLAVRNQQASAPGPQMPGSA
QKAIAPGATPVSSLSQASSQALAVAQASPGASGQSLNLSQAGGGSGNSLPGPLGPGGGGQ
APGGLGQLSSPGMGGGGSCPRKGTGVVQPLPSAQAVTVSQGSQTEAESAAAKKADADGPA
QQNVGMNLTRTATPAPSQTLISSATYTQIQPHSLIQQQQQIHLQQKQVVIQQQIAIHHQQ
QFQHRQSQLLHTATHLQLAPPQQPQPPPPAPAPAPALPAPPPPPPPPAVPPGAQLPPSPS
QPPAQTLVVQPMLQSSPLSLPPDPAAAKAPLPIQSKPPLAPLKPSQLGAAKLATTAPPPP
PPPHIPVQVVGTRQPGAAQAQALGLAQLTAAVPASRGMPGPGPPAPAHLAASPPVSQAPG
ALQECPPSLAAGLGLGPVQGAAHVVKSGAPAAAASPLVAQVPAAFYMQSMHLPGKPQTLA
VKRKAESEEDRDDGPALGSLLPAKASPVAESPKILEERGGFGEKADPGAGVNAKPPGGDL
AAVAPAPSAPPPTLAMVSRQMGDSKPPQAIVKPQILTHIIEGFVIQEGAEPFPVGCSQIL
KESEKPLATGLPAGLKEKQPAGPLGGSSPSAEPDKKANLLKCEYCGKYAPAEQFRGSKRF
CSMTCAKRYNVSCSHQFRLKRKKMKEFQEANYARVRRRGPRRSSSDIARAKIQGKRHRTQ
EDSSRGSDNSSYDEALSPTSPGPLSVRAGHGERELGNPATAPPTPELHGINPVFLSSNPS
RWSVEEVYEFIASLQGCQEIAEEFRSQEIDGQALLLLKEEHLMSAMNIKLGPALKICAKI
NVLKET
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgggtgttgagtcggagtcctggggaccctggacggctatcatggagacggagagcgag
cagacctccagctccgccaacgggagttccggctcgggggccaactctcggccccagata
gcgcagatgtcgctgtatgaacggcaggccgtgcaggccctgcaggctctgcagcgtcag
cccaacgcggctcagtatttccaccagttcatgctccagcagcagctcagcaatgcccag
ctgcatagcctggccgccgtccagcaggccaccatcgcggccagtcggcaggccagctcc
cccaacgccggcagcacgcagcagcagacggccaccacccaggcatcgatcaacctggcg
accacctcggccgcgcagctcatcagccgctcccagagcgtgagctccccgacggccacc
acgctcacccagtccgtgctgctgggcaaccccacctccccgccgctcaaccagtcgcag
gcccagatgtacctccggccacagctgggaaacctgttgcaggtcaaccggaccctgggc
cggaatgtgcctctggcctcccagctcatcctgatgcctaacggggcggtggctgcagtc
cagcaggaggtgccatcggctccgtcgccgggagcgcatgccgatgccgatcaggtgcag
aacttggcggtccggaaccagcaggcctcagccccgggcccccagatgccgggctctgcg
cagaaggccatcgcgcccggggccaccccggtctccagcctctcgcaggcctccagccag
gccctggcggtggctcaggcatcccccggcgcctctggccagtccctcaacctcagccag
gccggtggcggcagcgggaatagcctccccgggcccctgggtcccggcggtggtggccag
gcccccgggggcttgggtcagctgtcctcccccgggatgggcggcggtggcagctgcccc
cggaaaggcacgggggtcgtgcagcccctcccctcggcgcaggcggtgaccgtgagccag
ggcagccagacggaagccgagagcgccgcggccaagaaggctgacgccgatggcccggcg
cagcagaacgtgggcatgaacctgacgcggaccgccacgcccgcccccagccagaccctc
atcagctcagccacctacacgcagatccagccgcactccctcatccagcagcagcagcag
atccacctgcagcagaagcaggtggtgatccagcagcagatcgccatccaccaccagcag
cagttccagcaccgccagtcgcaactgttgcacacggccacgcacctgcagctggcgccg
ccgcagcagccgcagccgccgccgcccgcgcccgcacccgcgcccgcgctccccgcgccg
ccgccaccgccgccgccgcccgccgtcccgccgggcgcgcaactgccgccctcgccctcc
cagccgccggcgcagacgctggtggtgcagcccatgctgcagtcgtcgcccctgtcgctg
ccgcccgaccccgccgccgccaaggccccgctccccatccagtccaagccgcccctcgcg
cccctgaagccctcccagctgggcgccgccaaactggccaccaccgcgccgccgccgccg
ccgccgccccacatccccgtgcaggtggtgggcacgcggcagcccggggccgcgcaggcg
caggcgctgggcctggcccagctcaccgctgccgtccccgcatcccggggcatgcccggc
ccgggcccgcccgcccccgcccacctggccgcctcgccgcccgtgtcccaggcgcccggg
gcgctgcaggagtgtcccccgtccctggccgcgggcctgggcctgggccccgtgcagggc
gccgcgcacgtggtcaagagcggggcgcccgccgcagccgcctcgccgctggtggcccag
gtgcccgccgccttctacatgcagtccatgcacctgccgggcaaaccccagacgctggcc
gtgaagcgcaaggccgagtcggaggaggacagagacgacggccccgccttggggtccctg
cttcctgccaaggcgtccccagtagcagagagcccaaagatcctggaggagaggggtggc
ttcggagagaaagctgaccccggcgccggtgtgaacgccaagccccccggcggggacctc
gccgccgtggcccccgctccctcagctccgcctcccaccctcgccatggtgtccaggcag
atgggcgactccaaacccccccaggccatcgtgaagccccagatcctcacgcacatcatc
gagggctttgtcatccaggagggcgccgagcctttcccggtgggctgctctcagatcctg
aaagagtccgagaagccgcttgccacgggcctccccgcgggcctgaaggagaagcagccg
gccgggcccttgggcggaagtagcccgtcagctgagccagacaagaaggccaacctcctc
aagtgcgagtactgcggcaagtatgcgcccgctgagcagttccgcggctccaagcgcttc
tgctccatgacctgcgccaagaggtataatgtgagctgcagccaccagttccgactgaag
aggaaaaaaatgaaagagtttcaggaagccaattatgcgcgcgtgcgccggcgcggaccc
cgccgcagctcctcggacatcgcccgtgccaagatccagggcaagcgacaccggacgcag
gaagactccagccggggctcggacaactccagctacgacgaagccctctcccccacgtcg
ccggggcccctgtccgtgcgggccgggcatggggagcgggagctgggcaaccccgccacg
gcgccccccacgccggagctgcacggcatcaaccccgtgttcctgtccagcaaccccagc
cgctggagcgtcgaggaggtgtacgagttcatcgcctctctgcaagggtgccaagagatc
gcagaggagttccgctcccaggagattgacggacaggccctgctgctcctgaaggaagag
catctcatgagtgccatgaacatcaagctgggccccgccctcaagatctgcgccaagatc
aacgtcctcaaggagacctaa
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