Sorex fumeus (smoky shrew): 130043242
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Entry
130043242 CDS
T10594
Symbol
BCL11B
Name
(RefSeq) B-cell lymphoma/leukemia 11B isoform X1
KO
K22046
B-cell lymphoma/leukemia 11B
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
130043242 (BCL11B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfum03000
]
130043242 (BCL11B)
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130043242 (BCL11B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_16
zf-C2H2_4
zf-C2H2_15
zf-H2C2_5
Actin_micro
DUF3268
Motif
Other DBs
NCBI-GeneID:
130043242
NCBI-ProteinID:
XP_055991465
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MSRRKQGNPQHLSQRELITPEPEHVEPSILEEDEGLDIEEPSGLGLMMGGPDPDLLTCGQ
CQMNFPLGDILVFIEHKKKQCGSTLGSCYDKGLDKGSPPPASLRKVSEPVEIGIQVTPDE
DDHLLLPTKGICPKQENSAGPCRPAQLPAMTPIAASSHPPTSVISSPLRALGALQPCFPL
ACCGARPGLGDGPQGEGQTEAPFGCQCQLSGKDEPSSYICTTCKQPFTSAWFLLQHAQNT
HGFRIYLEPGPASSSLTPRLTIPPPLGPEAVAQSPLMNFLGDSNPFNLLRMTGPLLRDHP
GFGEGRLPGTPPLFSPPPRHHLDPHRLSAEEMGLVAQHPSAFDRVMRLNPMAIDSPAMDF
SRRLRELAGNSSTPPPVSPGRGNPMHRLLNPFQPSPKSPFLSTPPLPPLPPGGTPPPQPP
AKSKSCEFCGKTFKFQSNLIVHRRSHTGEKPYKCQLCDHACSQASKLKRHMKTHMHKAGS
LAGRSDDGLSAASSPEPGTSELAGDGLKAGDEDGGDFGVGGVGGGVGGGRRHHHHHHPES
DPSSLGAEPEEEDDDEEEEEEEELLLENESRPESSFSMDSELSRNRENGGVGVGLGVGGV
GGGVVVAGAVGAAAAAKALADEKALVLGKVMENVGLGALPPYGELLADKQKRGAFLKRAP
GAGGGGGAPGEPGAPGADDDEDAAGGCGDAGPGGVGVGVGGVGVGGVGVGGVGGVVGAVN
GRGGGFAPADPFPGLFPRKPAPLPSPGLNSAAKRIKVEKDLELPPAALIPSENVYSQWLV
GYAASRHFMKDPFLGFTDARQSPFATSSEHSSENGSLRFSTPPGDLLDGGLSGRSGTASG
GSTPHLGGPGPGRPSSKEGRRSDTCEYCGKVFKNCSNLTVHRRSHTGERPYKCELCNYAC
AQSSKLTRHMKTHGQIGKEVYRCDICQMPFSVYSTLEKHMKKWHGEHLLTNDVKIEQADR
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccgcaaacagggcaacccgcagcacttgtcccagagggagctcatcacccca
gagccagagcatgtggagcccagcatcctggaggaagatgaggggctggacatcgaagag
cccagcggcctggggctgatgatgggcggccccgaccctgacctgctcacctgtgggcag
tgccagatgaacttcccgctgggggacatcctggtctttatcgagcacaagaagaagcag
tgtggcagcaccctgggctcctgctatgacaaaggcctggacaagggcagccccccgccc
gcctccctcaggaaagtgtcggagccggtcgagatcggaatccaggtcacccccgacgaa
gatgaccacctgctcttgcccacgaaaggcatctgccccaagcaagagaactctgcaggg
ccgtgcaggcctgcacagctgcccgcgatgacccccatagccgcctcctcccaccctccc
acctccgtcatctcttctccgctgcgcgccctgggcgccctgcagccctgcttccctctg
gcctgctgcggcgcgcggcccggcctgggggacgggcctcagggtgagggtcagacggag
gctccctttggatgtcagtgtcagttgtcaggtaaagacgagccttccagctacatttgc
acgacatgcaagcagcccttcaccagcgcctggttcctgctgcagcacgcgcagaacacg
cacggcttccgcatctacctggagcccggcccggccagcagctcgctcacgccgcggctg
accatcccgccgccgctggggcccgaggcggtggcgcagtccccgctcatgaatttcctg
ggcgacagcaaccccttcaacctgctgcgcatgacgggcccgctgctgcgggaccacccg
ggcttcggcgagggccgcctgcccggcacgccgcccctgttcagcccgccgccgcgccac
cacctggacccgcaccgcctcagtgccgaggagatggggctcgtcgcccagcaccccagt
gccttcgaccgagtcatgcgcctcaaccccatggccatcgactcgcccgccatggacttc
tcgcggcggctgcgcgagctggcgggcaacagctccacgccgccgcccgtgtccccgggc
cgcggcaaccccatgcaccggctcctgaaccccttccagcccagccccaagtccccgttc
ctgagcacgccgccgctgcccccgctgcccccggggggcacgccgccgccgcagccgccg
gccaagagcaagtcctgcgagttctgcggcaagaccttcaagttccagagcaatctcatc
gtgcaccggcgcagccacacgggcgagaagccctacaagtgccagctgtgcgaccacgcg
tgctcgcaggcgagcaagctcaagcgccacatgaagacgcacatgcacaaggcgggctcg
ctggccggccgctccgacgacgggctgtcggccgccagctccccggagccgggcaccagc
gagctggcgggcgacgggctcaaggcgggcgacgaggacggcggcgacttcggcgtgggc
ggcgtgggcggcggcgtgggcggcggccggcgccaccaccaccaccaccaccccgagagc
gacccgtcctcgctgggcgccgagcccgaggaggaggacgacgacgaggaggaggaggag
gaggaggagctgctgctggagaacgagagccggcccgagtccagcttcagcatggactcg
gagctcagccgcaaccgcgagaacggcggcgtgggcgtgggcctgggcgtgggcggcgtg
ggcggcggcgtggtggtggcgggcgccgtgggcgccgccgccgccgccaaggcgctggcc
gacgagaaggcgctggtgctgggcaaggtcatggagaacgtgggcctgggcgcgctgccg
ccctacggggagctgctggccgacaagcagaagcgcggcgccttcctcaagcgcgcgccg
ggcgcgggcggcggcggcggcgcccccggggagcccggcgcgcccggcgcggacgacgac
gaggacgcggcgggcggctgcggggacgcgggccccggcggcgtgggcgtgggcgtgggc
ggcgtgggcgtgggcggcgtgggcgtgggcggcgtgggcggcgtggtgggcgccgtcaac
gggcgcggcggcggcttcgcgcccgccgaccccttcccggggctcttcccgcgcaagccc
gcgccgctgcccagccccgggctcaacagcgcggccaagcgcatcaaggtggagaaggac
ctggagctgccgcccgccgcgctcatcccctccgagaacgtgtactcgcagtggctggtg
ggctacgccgcgtcgcgccacttcatgaaggaccccttcctgggcttcacggacgcgcgc
cagtcgcccttcgccacctcgtccgagcactcgtccgagaacggcagcctgcgcttctcc
acgccgcccggggacctgctggacggcgggctgtccgggcgcagcggcacggccagcggc
ggcagcacgccgcacctgggcgggcccgggcccggccggcccagctccaaggagggccgg
cgcagcgacacgtgcgagtactgcggcaaggtcttcaagaactgcagcaacctcacggtg
caccgacggagccacaccggcgagcggccttacaagtgcgagctgtgcaactacgcgtgc
gcgcagagcagcaagctcacgcgccacatgaagacgcacgggcagatcggcaaggaggtg
taccgctgcgacatctgccagatgcccttcagcgtctacagcaccctggagaaacatatg
aaaaagtggcacggggagcacttgctgactaacgacgtcaaaatcgagcaggccgaccgc
agctaa
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