Sorex fumeus (smoky shrew): 130043259
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Entry
130043259 CDS
T10594
Symbol
NECTIN2
Name
(RefSeq) nectin-2 isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03266
Virion - Herpesvirus
sfum04514
Cell adhesion molecules
sfum04520
Adherens junction
sfum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
130043259 (NECTIN2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130043259 (NECTIN2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
130043259 (NECTIN2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130043259 (NECTIN2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfum04515
]
130043259 (NECTIN2)
04090 CD molecules [BR:
sfum04090
]
130043259 (NECTIN2)
Cell adhesion molecules [BR:
sfum04515
]
Immunoglobulin superfamily
Nectin family
130043259 (NECTIN2)
CD molecules [BR:
sfum04090
]
Proteins
130043259 (NECTIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
ig
V-set
Ig_2
I-set
Ig_CD22
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
130043259
NCBI-ProteinID:
XP_055991489
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MARAAALRPSRSPPTLPLLPLLLLLLREAGAQDVGVRVPPEVRGLLGATVELPCHLLPPT
PEVRVSQVMWMRQDASKTSQNLAIFHPSYGPSFPSSKPGKDRLSFVTAGQNPSSAPGSET
EVRDATLALHGLTVEDEGNYTCEFATFPWGTSRGVTWLRAIAQPQNHAEKQEVTLSLEPM
PVARCVSTGGRPPARVSWLSPLDGEASESQVAGPVPGTSTVTSRFTLVPLGRVDGVTVTC
KVEHESFEEPVLLPVTLSVRYPPEVSISGYDDNWYIGRSEATLTCDVRSNPEPTGYDWST
TSGLFPASALARGPQLVIHSVDRLVNTTFICTVTNAVGTGRAEQLVLVRETPNTAGAGAT
GGIIGGIIAAIIATAVAATGILMCRQQQKEQRLQGAEEEDLEAPPSYKPPTPKAKLEEPE
MPSQLFTLGASEHSPLKTPYFDAGVSCTEQEGPRYHELPTLEERSGSLLRGATSLGNPIL
VPSVPPAVEGISLDMEDDDDEGDDDYLDKISPIYDALSYTSPSDSYQGKGFVMSRAMYV
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcccgggccgcagccctccggccgtccagatcgccgccgacgctgccgctgctgccc
ttgttactgctgctgctccgggaagcgggagcccaggatgtgggagtccgagtgccgcct
gaagtgcggggcctcctgggggccaccgtggagctgccgtgccacctgctgccccccact
ccggaagtccgcgtgtcacaggtgatgtggatgcgccaggatgccagcaagaccagccag
aacctggccatcttccacccctcctacggccccagcttccccagctccaagcccggcaag
gatcgcctgtcgttcgtcaccgccggccagaacccgagcagtgcgccaggctccgagacg
gaggtgcgcgatgccacgctggcgctgcacgggctgacggtggaggacgagggcaattac
acctgcgagtttgccaccttcccctggggcaccagtcgcggggtcacctggctccgagcc
atagcccagccccagaaccacgcggaaaagcaggaagtcaccctgagcctggagcccatg
cccgtcgcccgctgcgtgtccacggggggccgcccgccggcccgggtctcttggctgtcc
cctctggacggggaggccagcgagagccaggtggcggggcccgtgcctggtacgtccact
gtcaccagtcgcttcaccttggtgcccctgggccgcgtcgatggcgtcacagtcacctgc
aaagtggagcacgagagcttcgaggagcccgtcctgctgcctgtgaccctgtccgtgcgc
tatccccccgaggtctctatctccggctatgatgacaactggtacatcggccgcagcgag
gccaccctgacctgtgacgtccgcagcaacccggagcccacgggctatgactggagcacg
acttcaggcctcttcccagcgtcagccctcgcccggggcccgcaactggtgatccactcc
gtggacaggctggtgaacaccaccttcatctgcaccgtcaccaatgccgtgggcaccggc
cgtgccgagcagctcgtcctggtgcgagagacccccaacacggcaggtgcgggggccacc
gggggcatcatcggaggcatcatcgctgccatcatcgccacggccgtggccgccacaggc
atcctgatgtgccggcagcagcagaaggaacagaggctgcaaggggcggaggaggaggac
ctggaggctcctccctcttacaagccacccacccccaaggcgaagctggaggagccagaa
atgccctcccaactcttcactctgggggcctcagagcacagcccgctcaagacgccttac
tttgatgctggtgtctcctgcactgagcaggaggggcctcggtaccatgagctgcctacg
ctggaggagcgatcggggtctctgctccggggagccacgagcctgggaaaccctatcctg
gtgccctctgtgccccccgcagtggaggggatttccctggacatggaggatgatgatgac
gaaggggacgacgactatctcgacaagatcagtcccatctatgacgccctgtcctatacc
agcccgtccgattcctaccagggcaaaggttttgtcatgtcccgggccatgtatgtgtga
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