Shigella flexneri 2457T (serotype 2a): S2984
Help
Entry
S2984 CDS
T00128
Symbol
ygcF
Name
(GenBank) hypothetical protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
sfx
Shigella flexneri 2457T (serotype 2a)
Pathway
sfx00790
Folate biosynthesis
sfx01100
Metabolic pathways
Module
sfx_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
sfx00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
S2984 (ygcF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfx03016
]
S2984 (ygcF)
Enzymes [BR:
sfx01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
S2984 (ygcF)
Transfer RNA biogenesis [BR:
sfx03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
S2984 (ygcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AAP18104
UniProt:
P64556
LinkDB
All DBs
Position
complement(2858336..2859007)
Genome browser
AA seq
223 aa
AA seq
DB search
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAK
TKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETS
GTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTD
DKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacccgattaacgagatgttccagaccctgcaaggtgagggttactttaccggc
gttcccgccatttttattcgtttacagggatgcccggttggctgtgcctggtgcgacacc
aaacacacctgggaaaagcttgaggatcgggaagtctcccttttcagcattctggcgaag
accaaagagagtgataagtggggggcggcgagcagtgaagacttgctggctgtcattggt
cgtcagggatataccgcgcggcatgtggtgattacgggtggtgagccttgcattcatgat
ttgctgccactgactgacctgctcgaaaagaacggttttagctgccagatcgaaaccagt
ggaactcatgaagtacgctgcacaccgaatacctgggttaccgtatcgccaaagctgaac
atgcgcggcggctatgaagtgttgtcacaggcactggagcgagccaacgaaatcaagcat
ccagtggggcgcgtacgcgatattgaagcactggatgaactactggcaacgctgaccgat
gataaaccgcgagtcattgcactgcagccgattagccaaaaggatgatgccacacgattg
tgcattgaaacctgtattgcgcgtaattggcgtttgtcgatgcaaacacataaatattta
aatattgcctga
DBGET
integrated database retrieval system
