Streptomyces galilaeus: CP966_04320
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Entry
CP966_04320 CDS
T06932
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sgal
Streptomyces galilaeus
Pathway
sgal03030
DNA replication
sgal03410
Base excision repair
sgal03420
Nucleotide excision repair
sgal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP966_04320 (ligA)
03410 Base excision repair
CP966_04320 (ligA)
03420 Nucleotide excision repair
CP966_04320 (ligA)
03430 Mismatch repair
CP966_04320 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgal03032
]
CP966_04320 (ligA)
03400 DNA repair and recombination proteins [BR:
sgal03400
]
CP966_04320 (ligA)
Enzymes [BR:
sgal01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CP966_04320 (ligA)
DNA replication proteins [BR:
sgal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CP966_04320 (ligA)
DNA repair and recombination proteins [BR:
sgal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CP966_04320 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP966_04320 (ligA)
MMR (mismatch excision repair)
DNA ligase
CP966_04320 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CP966_04320 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
PTCB-BRCT
Nlig-Ia
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
QEU64573
LinkDB
All DBs
Position
complement(957766..959868)
Genome browser
AA seq
700 aa
AA seq
DB search
MAGMTTPAAQIVDAAAYAQAVEDAVQASAAYYTGGTSVLDDDAYDRLVRGIATWEAAHPE
QVLPDSPTGKVAGGAVEGDVPHTVAMLSLDNVFSPEEFTAWAASLARRVGHEAERYSVEP
KLDGLAIAARYTRGRLTRLITRGDGTAGEDVTHAAGTVDGLPERLTEPVTVEVRGEVLMT
TAQFEHANEVRTAHGGQPFANPRNAAAGTLRAKDRAYTVPMTFFGYGLLPLADTEADLAA
ALGEAAHSDLMARAAVLGVNTTATTAVPGVTADTVEAVLARVREIGALRPELPFGIDGIV
VKADLAADQQAAGSGTRAPRWAIAYKLPAVEKITRLLEVEWNVGRTGIIAPRAVLAPVEI
DGSTITYATLHNPADITRRDLRLGDHVMVHRAGDVIPRVEAPVAHLRTGEEQPIVFPAVC
PRCGSAIDTGEQRWRCENGRNCHLVASLSYAAGRDQLDIEGLGQTRVVQLVEAGLVADLA
DLFTLTREQLLGLDRMGETSTDNLLAALATAKGRPLARVLCALGVRGTGRSMSRRIARHF
ATMDHLRAADAEAIQRVDGIGTEKAPSIVAELAELAPLIDKLVAAGVNMTEPGATPPAAP
AADEDDGTTESAAEPAGGPLAGMTVVVTGAMTGPLEKLSRNEMNELVERAGGRSSSSVSK
KTSLVVAGEGAGSKRAKAETLGVRLATPDEFAVLVADLIA
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtatgacgacacctgccgcacagatcgtggatgccgccgcctacgcgcaggcg
gtcgaggacgccgtacaggcgtccgccgcctactacaccgggggcacctcggtgctggac
gacgacgcctacgaccgcctggtgcggggaatcgcgacctgggaggccgcccatcccgag
caggtcctgcccgactcgccgaccggcaaggtggcgggcggcgccgtggagggcgacgtc
ccgcacacggtcgcgatgctcagcctggacaacgtgttctcgccggaggagttcaccgcc
tgggccgcgtccctggcccggcgcgtcggccacgaggcggagcggtacagcgtcgagccg
aagctggacggcctcgcgatcgcggcccgctacacccgcggtcgcctgacccggctgatc
acgcggggcgacgggacggccggcgaggacgtcacgcacgccgccggcaccgtcgacggc
ctgcccgagcggctgaccgagccggtcaccgtggaggtgcgcggcgaagtcctcatgacg
accgcccagttcgagcacgccaacgaggtccgtaccgcgcacgggggccagcccttcgcc
aacccgcgcaacgccgccgcgggcaccctgcgcgccaaggaccgcgcctacaccgtgccg
atgaccttcttcggctacggcctgctccccctcgccgacaccgaggcggacctcgccgcc
gccctcggcgaggcggcccacagcgacctgatggcccgtgccgcggtgctcggcgtgaac
acgaccgccacgacggccgtgcccggcgtcaccgcggacaccgtggaggccgtccttgcc
cgggtgcgggagatcggcgcactccgtcccgagctgccgttcgggatcgacgggatcgtc
gtcaaggccgacctggccgccgaccagcaggccgccggatcgggcaccagggccccgcgc
tgggcgatcgcctacaaactgccggccgtcgagaagatcacccgcctcctggaggtggag
tggaacgtgggccgtaccggcatcatcgcgccccgcgccgtcctcgccccggtggagatc
gacggctccacgatcacctacgccaccctgcacaacccggccgacatcacccgccgcgac
ctgcgcctcggcgaccacgtcatggtccaccgggccggtgacgtcatcccccgcgtcgag
gcccccgtcgcccacctgcgcaccggcgaggaacagccgatcgtcttccccgccgtctgc
ccgcgctgcgggtcggccatcgacaccggcgagcagcgctggcgctgcgagaacggccgc
aactgccacctcgtcgcctccctctcctacgccgccggacgcgaccagctcgacatcgag
ggcctcggccagacccgcgtcgtacagctcgtcgaagcgggcctggtcgccgatctcgcc
gacctgttcaccctcacccgcgaacagctcctcggcctggaccggatgggcgagaccagc
accgacaacctgctcgccgcgctcgccacggccaagggcagaccgctggcgcgggtactg
tgcgcgctcggcgtgcgcggcaccgggcgctccatgtcccgccgtatcgcccgacacttc
gccaccatggaccacctgcgggccgccgacgcggaagcgatccagcgggtggacggcatc
ggcaccgagaaggccccgtcgatcgtggcggagctggccgaactcgccccgctgatcgac
aagctggtcgcggcgggagtcaacatgaccgagcccggcgccaccccgccggccgccccg
gcggccgacgaggacgacggcaccaccgaatccgctgccgaaccggccggcgggccgctg
gccggcatgacggtcgtggtcaccggtgcgatgacgggcccgctggagaaactgagccgc
aacgagatgaacgaactcgtcgagcgcgcgggcggccgctcctcctccagcgtctccaag
aagaccagcctggtcgtcgcgggggagggcgccggctccaagcgcgccaaggcggagacc
ctcggcgtgcgcctggccacccccgacgagttcgccgtcctggtcgccgacctcatcgcc
tga
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