Streptomyces galilaeus: CP966_25600
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Entry
CP966_25600 CDS
T06932
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
sgal
Streptomyces galilaeus
Pathway
sgal03030
DNA replication
sgal03410
Base excision repair
sgal03420
Nucleotide excision repair
sgal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CP966_25600 (ligA)
03410 Base excision repair
CP966_25600 (ligA)
03420 Nucleotide excision repair
CP966_25600 (ligA)
03430 Mismatch repair
CP966_25600 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgal03032
]
CP966_25600 (ligA)
03400 DNA repair and recombination proteins [BR:
sgal03400
]
CP966_25600 (ligA)
Enzymes [BR:
sgal01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CP966_25600 (ligA)
DNA replication proteins [BR:
sgal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CP966_25600 (ligA)
DNA repair and recombination proteins [BR:
sgal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CP966_25600 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP966_25600 (ligA)
MMR (mismatch excision repair)
DNA ligase
CP966_25600 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CP966_25600 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
HHH_5
HHH
NHase_beta_N
DUF8512
Zn_ribbon_TFIIB
Zn_ribbon_CLPX_N
Motif
Other DBs
NCBI-ProteinID:
QEU68249
LinkDB
All DBs
Position
5568068..5570263
Genome browser
AA seq
731 aa
AA seq
DB search
MAGDRQAETTVPSEAREKHAQLAEQIEEHRFRYYVKDAPVVSDAEFDRLLRSLEAVEERY
PELRTPESPTQKVAGAYETEFTAVQHRERMLSLDNAFDDLELAAWAERVHKDVGASAYHF
LCELKVDGLAVNLTYENGRLTRAATRGDGRTGEDITPNVRTIAEIPDRLSGDGVPSLVEI
RGEVYFPMEKFQELNARLVEAGDKPFANPRNAAAGSLRQKDPRVTAGRPLHMVVHGIGAL
EGYEGLTRLSEAYDLLKSWGLPTSRHNKVVDDLDGVRAFIAYYGENRHSVEHEIDGVVVK
LDEIRLQGRLGSTARAPRWAIAYKYAPEEVNTKLLNIRVGVGRTGRVTPYAQVEPVTVAG
SEVEFATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEILGPVADLRDGSEREFVMPSECPE
CGTPLRPMKEGDIDLRCPNARTCPAQLRERLFYLAGRKALDIDHFGYVSAAALTKPLEPE
QPPLADEGDLFDLTIEQLLPIRAYVLDQDSGLPKRDPKTGEEKIATVFANQQGEPKKNAL
AMLDTIAAAKERPLARVLTGLSIRHVGPVAAEALAREFRSIDRIEQASEEELAGTDGVGP
VIAASLKEWFAEDWHREIIRKWKAAGVRMEEEGSGEDQGPRPLEGLTVVVTGTLEHFTRD
GAKDALQSRGAKVTGSVSKKTSFVVVGESPGSKYDKAMQLKVPVLDEDGFTVLLGQGAEA
AAEAALPVPES
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtggccggcgacaggcaagcggagacgacggtgccctcggaggcacgggagaagcacgcg
cagctcgctgagcagatcgaggagcaccgcttccggtactacgtgaaggacgcccccgtc
gtcagcgacgcggagttcgaccgcctcctgcgctccctggaggcggtggaggagcggtat
cccgaactgcgcacccccgaatcgccgacacagaaggtcgccggggcgtacgagacggag
ttcaccgccgtccagcaccgcgagcgcatgctgtcgctggacaacgccttcgacgatctg
gagctggccgcctgggccgagcgcgtccacaaggacgtcggcgcctccgcgtaccacttc
ctgtgcgagctgaaggtcgacggactcgccgtcaacctcacgtacgagaacgggcggctg
acccgcgcggccacccgcggtgacggccggaccggcgaggacatcacgcccaacgtgcgg
accatcgcggagatcccggaccggctgtccggcgacggtgtcccgtccctcgtcgagatc
cgcggcgaggtctacttcccgatggagaagttccaggagctgaacgcccgtctggtcgag
gccggcgacaagcccttcgccaacccgcgcaacgcggcggccggttcactgcgccagaag
gacccgcgcgtcaccgcgggccgccccctgcacatggtggtccacggcatcggcgccctg
gaggggtacgagggcctcacccgcctctccgaggcctacgacctcctcaagtcctggggc
ctgcccacctcccgccacaacaaggtggtcgacgacctcgacggcgtacgggcgttcatc
gcgtactacggcgagaaccggcactccgtggagcacgagatcgacggtgtcgtcgtcaag
ctcgacgagatccggctccaggggcggctcggctccacggcccgtgccccgcgctgggcg
atcgcctacaagtacgcgccggaggaggtcaacaccaagcttctcaacatccgcgtgggc
gtcggccgcaccggccgcgtcacgccgtacgcgcaggtcgagccggtgaccgtggccggg
tccgaggtcgagttcgcgaccctgcacaaccaggacgtcgtcaaggccaagggcgtcctc
atcggcgacacggtggtgctgcgcaaggcgggtgacgtcatccccgagatcctcgggccg
gtcgccgacctgcgcgacggcagcgagcgcgagttcgtgatgccgtccgagtgccccgag
tgcggcaccccgctgcggccgatgaaggagggcgacatcgacctgcgctgccccaacgcc
cgcacctgccccgcccagttgcgcgagcggctcttctacctcgccggccgcaaggccctg
gacatcgaccacttcgggtacgtctccgccgcggccctcaccaagccgctggagcccgag
cagccgccgctggccgacgagggcgacctgttcgacctcaccatcgagcagctgctgccc
atcagggcgtacgttctcgaccaggacagcggtctgcccaagcgggacccgaagaccggc
gaggagaagatcgccaccgtcttcgccaaccagcagggcgaaccgaagaagaacgcgctc
gccatgctggacaccatcgccgcggccaaggagcgcccgctggcccgcgtcctcaccggc
ctctccatccggcacgtggggccggtcgcggccgaggcgctggcccgcgagttccgctcc
atcgaccgcatcgagcaggcgagcgaggaggagctggccggcaccgacggcgtcggcccg
gtcatcgcggcctccctcaaggagtggttcgccgaggactggcaccgcgagatcatccgc
aagtggaaggccgccggcgtccgcatggaggaggagggctccggcgaggaccagggcccg
cgcccgctggaaggtctcaccgtcgtggtcaccggcaccctggagcacttcacccgtgac
ggcgccaaggacgccctccagagccgcggggcgaaggtgaccggatcggtgtcgaagaag
acgtcgttcgtcgtggtgggtgagagccccggatcgaagtacgacaaggcgatgcagctg
aaggttccggtgctggacgaggacggcttcacggtcctcctcggacagggggcggaggcg
gctgccgaagccgccctgccggtccccgagtcctga
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