KEGG   Streptomyces globisporus: WQO_25385
Entry
WQO_25385         CDS       T04209                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
sgb  Streptomyces globisporus
Pathway
sgb03030  DNA replication
sgb03410  Base excision repair
sgb03420  Nucleotide excision repair
sgb03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sgb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    WQO_25385
   03410 Base excision repair
    WQO_25385
   03420 Nucleotide excision repair
    WQO_25385
   03430 Mismatch repair
    WQO_25385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sgb03032]
    WQO_25385
   03400 DNA repair and recombination proteins [BR:sgb03400]
    WQO_25385
Enzymes [BR:sgb01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     WQO_25385
DNA replication proteins [BR:sgb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     WQO_25385
DNA repair and recombination proteins [BR:sgb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     WQO_25385
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     WQO_25385
   MMR (mismatch excision repair)
    DNA ligase
     WQO_25385
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      WQO_25385
SSDB
Motif
Pfam: DNA_ligase_aden OB_DNA_ligase Nlig-Ia HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 HHH zf-IS66 Zn_ribbon_TFIIB DUF8512
Other DBs
NCBI-ProteinID: ALU96368
LinkDB
Position
5734348..5736579
AA seq 743 aa
MAGEERVEQESSVPAEAREEHALLAERIEEHRFRYYVKDQPVVSDADFDRLLRSLEALED
EHPALRTPDSPTQKVAGPYITEFTSVEHRERMLSLDNAFDDEELAAWADRVAKETGTPDH
HFLCELKVDGLAVNLTYEHGRLTRAATRGDGRTGEDITPNVRTIAEIPHRLKGADIPALV
EIRGEVFFPMEGFEELNARLVAADDKPFANPRNAAAGSLRQKDPKVTATRPLHMVVHGIG
AHEGLSIDRLSHAYDLLHAWGLPTAQHNKVVDSLAGVREFIAYFGEHRHSVEHEIDGVVV
KLDEIPLQGRLGSTSRAPRWAIAWKYAPEEVNTKLVNIRVGVGRTGRVTPYAQVEPVEVA
GSEVEFATLHNQNVVKAKGVLIGDTVVLRKAGDVIPEILGPVVDLRDGTEKPFEMPTHCP
ECGTELRPMKEGDIDLRCPNARTCPAQLRERVFYLAGRKSLDIDHFGYVAAAALTRPLEP
AEPVLKDESDLFSLTIEQLLPIRAYVLDQDSGLPKRDPKTGEEKIATVFANQQGEPKKNA
VAMLEGIAAAKEAPLARILTGLSIRHVGPVAAQELARQFRSVDRIDEATEEELAAADGVG
PTIAASVKQWFAEDWHREILRKWREAGVRMADEGSDEDQGPRPLEGLTVVVTGTLAAHTR
DGAKEALQALGAKVTGSVSKKTAFVVVGDNPGSKYDKAMQLKVPVLDEDGFAILLEDGPE
RAREAALSAPEAAPEPAPEDSAS
NT seq 2232 nt   +upstreamnt  +downstreamnt
atggcgggcgaagagcgggtggagcaggagagttcggtcccggcggaggcgcgggaggag
cacgcgctgctggccgagcggatcgaggagcaccgcttccggtactacgtgaaggaccag
ccggtcgtcagcgacgccgacttcgaccggctgctgcgctccctggaggccctggaggac
gagcacccggcgctgcgcacccccgactccccgacccagaaggtcgccgggccgtacatc
acggagttcacctccgtcgagcaccgcgagcggatgctctccctggacaacgccttcgac
gacgaggagctggccgcctgggccgaccgcgtcgccaaggagaccggcacccccgaccac
cacttcctgtgcgagctgaaggtcgacggcctcgccgtcaacctcacctacgagcacggc
cgcctcacccgcgcggccacccgcggcgacggccgcaccggcgaggacatcacccccaac
gtccggacgatcgccgagatcccgcaccgtctgaagggcgcggacatccccgcgctcgtc
gagatccgcggcgaggtcttcttccccatggaaggcttcgaggagctgaacgcccggctg
gtcgccgccgacgacaagcccttcgccaacccgcgcaacgcggccgccggatcgctgcgc
cagaaggaccccaaggtcaccgccacccgcccgctgcacatggtggtgcacggcatcggc
gcccacgagggcctgagcatcgaccgcctctcccacgcctacgacctcctgcacgcctgg
ggtctgcccaccgcccagcacaacaaggtcgtcgactccctcgccggcgtccgggagttc
atcgcgtacttcggcgagcaccgccactccgtggagcacgagatcgacggcgtcgtcgtc
aagctcgacgagatcccgctccagggccgcctgggttccacctcgcgcgccccccgctgg
gccatcgcctggaagtacgcccccgaagaggtcaacaccaagctggtcaacatccgtgtc
ggcgtcggccgcaccggccgtgtcactccgtacgcccaggtcgagccggtcgaagtggcc
ggttccgaggtcgagttcgccaccctccacaaccagaacgtggtcaaggccaagggcgtc
ctcatcggggacaccgtggtcctgcgcaaggcgggcgacgtcatcccggagatcctcggc
cccgtcgtcgatctgcgcgacggcaccgagaagcccttcgagatgccgacccactgcccc
gagtgcgggacggagctgcgcccgatgaaggagggcgacatcgacctccgctgccccaac
gcccgcacctgcccggcccagttgcgcgagcgcgtcttctacctcgccgggcgcaagagc
ctcgacatcgaccacttcggctatgtggccgccgccgccctgacccgcccgctggagccc
gccgagcccgtcctcaaggacgagagcgatctgttctcgctcaccatcgagcagttgctg
ccgatccgggcgtacgtcctggaccaggacagcgggctgcccaagcgcgacccgaagacc
ggcgaggagaagatcgcgacggtcttcgccaaccagcagggcgagccgaagaagaacgcg
gtggccatgctggagggcatcgccgccgccaaggaggcgcccctcgcccggatcctcacc
gggctctccatccgccatgtcgggccggtcgccgcccaggagctggcccgccagttccgc
tccgtcgaccggatcgacgaggcgaccgaggaggagctggccgccgccgacggcgtcggg
cccaccatcgccgcctcggtcaagcagtggttcgccgaggactggcaccgcgagatcctg
cgcaagtggcgcgaggccggggtgcggatggccgacgagggctccgacgaggaccagggg
ccccgccctctcgaaggactcaccgtcgtcgtcaccggcaccctcgccgcccacacgcgc
gacggcgccaaggaagccctccaggcgctcggcgccaaggtcaccggatcggtgtccaag
aagaccgcgttcgtggtcgtcggcgacaaccccggctccaagtacgacaaggcgatgcag
ctgaaggtgcccgtgctcgacgaggacggattcgcgatcctgctcgaggacggacccgaa
cgcgcccgggaagcagccctgtccgccccggaagccgcgcccgagcccgccccggaggac
agcgcgtcgtag

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