Streptomyces griseorubiginosus: DWG14_03856
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Entry
DWG14_03856 CDS
T06099
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sge
Streptomyces griseorubiginosus
Pathway
sge03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DWG14_03856 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sge03400
]
DWG14_03856 (pdg)
Enzymes [BR:
sge01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DWG14_03856 (pdg)
DNA repair and recombination proteins [BR:
sge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DWG14_03856 (pdg)
Prokaryotic type
DWG14_03856 (pdg)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AYC39615
UniProt:
A0AAI8L0Y5
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All DBs
Position
complement(4406615..4407634)
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AA seq
339 aa
AA seq
DB search
MNPVKKSASAKKAAPVVKAAGSKKAAPVERAAPVEKAAASKKAAAGKKAAPVKEAAVAPK
KAAAAVKKASAAKTVAPKPPRNESHTALVRRARRINRELAEVFPYAHPELDFENPFQLIV
ATVLSAQTTDLRVNQTTPSLFAKYPTPEDLAAANPEEVEEILRPTGFFRAKTKSVIGLSK
ALVENHAGEVPGRLEDLVKLPGVGRKTAFVVLGNAFGRPGITVDTHFQRLVKRWQWTEES
EPDKIEAAVAALFPKSDWTDLSHHVIWHGRRICHARKPACGACPIAPLCPAYGEGETDPD
KAARLLKYEKGGFPGQRLNPPQAYLDAGGKAAPPFGAAG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtgaagaagagcgcttcggcgaagaaggcggctccggtcgtgaaggctgcc
gggagcaagaaggccgctccggtcgagagggccgctccggtcgagaaggctgctgcgagc
aagaaggccgctgcgggtaagaaggctgctccggtcaaggaggcggccgtggcccccaag
aaggcggctgccgcggtgaagaaggcgtcggctgccaagacggtcgcgcccaagccgccg
cggaacgagtcgcacaccgccctcgtgcgccgtgcccggcgtatcaaccgcgagctcgcc
gaggtgttcccgtacgcccaccccgagttggacttcgagaaccccttccagctgatcgtg
gccaccgtgctgtccgcgcagaccaccgacctgagggtcaatcagacgactccctcgctc
ttcgcgaagtaccccacccccgaggacctggccgcggcgaaccccgaggaggtcgaggag
atcctgcggccgaccgggttcttccgggccaagaccaagtcggtgatagggctgtcgaag
gccctcgtggagaaccacgcgggggaggtgccgggccggctcgaagacctcgtcaagctg
cccggcgtgggccgcaagaccgccttcgtggtgctgggcaacgcgttcgggcggcccggc
atcaccgtggacacgcacttccagcggctggtcaagcgatggcagtggaccgaggagagc
gagcccgacaagatcgaggccgccgttgccgcgctcttcccgaagagcgactggaccgac
ctctcgcaccacgtcatctggcacggccgccggatctgccacgcccgtaagcccgcgtgc
ggcgcctgccccatcgcgcccctctgcccggcctacggcgagggcgagacggacccggac
aaggcggccaggctcctcaagtacgagaagggcggcttcccgggccagcgcctgaaccca
ccgcaggcctacctggacgccggcggcaaggccgcgccgccgttcggggccgccgggtga
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