Stenotrophomonas geniculata: RKE57_04600
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Entry
RKE57_04600 CDS
T09411
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen01501
beta-Lactam resistance
sgen01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RKE57_04600
01503 Cationic antimicrobial peptide (CAMP) resistance
RKE57_04600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sgen03036
]
RKE57_04600
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgen02000
]
RKE57_04600
01504 Antimicrobial resistance genes [BR:
sgen01504
]
RKE57_04600
Chromosome and associated proteins [BR:
sgen03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RKE57_04600
Transporters [BR:
sgen02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RKE57_04600
Antimicrobial resistance genes [BR:
sgen01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RKE57_04600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
SOAR
Tab2-like_C
HlyD_D4
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
WNF11419
LinkDB
All DBs
Position
985630..986805
Genome browser
AA seq
391 aa
AA seq
DB search
MNLLPTPLPHHARPLPIRRPALLALVLLGLLTACGKDAPTPAGRLHEVEVLTLQERPLAM
EQELPGRTIASQESDVRPQVDGVLVKRLFEEGETVRAGQPLFQIEPALYQAALNQAQANL
KTAEAAAVTARLRAQRMQALGGEQLAARQDVDDAIASGQQAAAAVQAAQASLDTARTRLG
FATVTAPIAGRIGRALFTPGALVTSGQANPLARIQQVDPMNVDITQSSNEYLALRRAIAD
GGVQATTAAVRLRLSDGSAYPLPGTLEFADIDVQQETGSITLRARFPNPAGQLLPGMYVR
ALVGQGTRQQALLVPQAAVDRSPKGEAQVWVVDEGGKAKLRLFRTARAVGDQWLVLDGLA
AGEQVVVAGTQGLADGMAVRVKSAPAPAGKD
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcctgcccaccccgctgccacaccacgcccggccactgccgatccggaggcca
gcgctgcttgcgctcgttctgctcggcctgttgacggcctgcggcaaggatgcgcccacg
ccggccggcaggcttcacgaggtggaggtgctgaccctgcaggaaaggccgctggcgatg
gaacaggagctgccggggcggaccatcgcatcgcaggagtcggatgtgcgcccgcaggtg
gatggcgtgctggtgaaacgcctgttcgaagagggcgaaaccgtgcgtgccgggcagcct
ttgttccagatcgaaccggccctgtaccaggcggcgttgaatcaggctcaggccaacctg
aaaaccgccgaagcggcggcagtgaccgcacgcctgcgcgcgcaacggatgcaggcgctg
ggcggcgagcagctggccgcgcgccaggacgtggatgacgccatcgccagcgggcagcag
gccgcagccgcggtacaggcggcacaggcgagcctggataccgcgcgcacgcggcttggt
ttcgccacggtgaccgcgccgatcgccggtcgcatcggccgcgcgctgttcacaccgggt
gcgctggtcacctcgggccaggccaacccactggcgcggatccagcaggtcgacccgatg
aacgtggacatcacccagtccagcaacgagtacctggccttgcgccgcgccatcgccgac
ggtggcgtgcaggccaccaccgctgcggtgcggctgaggctgtccgatggcagcgcgtat
ccgttgcccggcactctggaatttgccgatatcgacgtgcagcaggaaaccggcagcatc
accctgcgtgcacgttttcccaatcccgccgggcagctgctgccaggcatgtacgtgcgc
gcgctggtggggcagggcacccgccagcaggcgctgctggtgccacaggctgcggtcgac
cgcagcccgaagggcgaggcgcaggtgtgggtggtggatgagggcggcaaggcgaagctg
cgcctgttccgcaccgcgcgtgcggtgggcgatcagtggctggtgctcgatggcctggcc
gccggtgaacaggtggtggtggccggcacgcagggcttggccgatggcatggcggtacgg
gtgaagtctgcgccggcaccggccgggaaggactga
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