KEGG   Stenotrophomonas geniculata: RKE57_13650
Entry
RKE57_13650       CDS       T09411                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
sgen  Stenotrophomonas geniculata
Pathway
sgen01501  beta-Lactam resistance
sgen01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:sgen00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    RKE57_13650
   01503 Cationic antimicrobial peptide (CAMP) resistance
    RKE57_13650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sgen03036]
    RKE57_13650
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sgen02000]
    RKE57_13650
   01504 Antimicrobial resistance genes [BR:sgen01504]
    RKE57_13650
Chromosome and associated proteins [BR:sgen03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    RKE57_13650
Transporters [BR:sgen02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   RKE57_13650
Antimicrobial resistance genes [BR:sgen01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    RKE57_13650
SSDB
Motif
Pfam: BSH_RND Beta-barrel_RND RND-MFP_C HH_MFP_RND YknX_C BSH_CusB HH_EMRA HH_YBHG Beta-barrel_RND_2 HH_AprE BSH_CzcB
Other DBs
NCBI-ProteinID: WNF09113
LinkDB
Position
2945061..2946329
AA seq 422 aa
MTAPLRTLALTCAVAVALAACKKPEQQTPPPPEVGVIDAKPQTLPLQRELVGRLSPFRSA
DVRARVPGVLLKRVYQEGSQVKQGQPLFLIDPAPLRASLNASEAQLASARATYANAKVAA
DRARSLAPQQFVSKSDLDNAESAERTALAAVKQAEAAVTSSRISLGYTEVTAPISGVANK
QQVTEGALVGQGDVTLLTTVDQLDPLYVNFSLSVDELTQLRAQQAKGALALSGDGKATVN
VKLADGTTYSEPGTLDFSSTTVDPATGAVSLRALLPNPQQILLPGAFVSFQANLGERNNA
YLVPQQALLRDTTGGYVMVVGADGKVIRKNVKTDGAQNGNWLVSDGLAAGDKVIVAGVQK
VKEGAPAVAKPWTPGQDANGKPAAGGAAPAGAAPAAGKAPADAAKPEQADAAKPAATDSN
KQ
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaccgccccactccgcacccttgccttgacgtgcgccgttgctgtcgcgctggctgcc
tgcaagaagccggaacagcagacgcccccgccgccggaggtgggcgtgatcgacgccaag
ccgcagaccctgccgctgcagcgtgagctggtcggccgcctgtcgccgttccgcagcgcc
gacgtgcgtgcgcgcgtgccgggcgtactgctcaagcgcgtctaccaggaaggctcccag
gtcaagcaggggcaacccctgttcctgatcgacccggcgccgctgcgtgcctcgctcaac
gcctccgaggcccagctggcttcggcccgcgccacctacgccaatgccaaggtggccgcc
gaccgcgcccgttcgctggcgccgcagcagttcgtctccaaatccgacctggacaacgcc
gaatcggccgaacgcaccgcgctggccgcggtcaagcaggccgaagcggcggtgacctcc
tcgcgcatcagcctgggctataccgaagtgaccgcaccgatcagtggcgtggccaacaag
cagcaggtcaccgagggcgcactggtcggccagggcgatgtgaccctgctgaccaccgtc
gaccagctcgacccgctgtacgtgaacttctcgctgagcgtggatgagctgacccagctg
cgtgcgcagcaggccaagggcgcgctggcgctgtcgggtgacggcaaggccacggtcaac
gtcaagctggccgacggcaccacttacagcgagccgggcacgctggacttctcttcgacc
acggtcgacccggccaccggcgcggtatcgctgcgtgcgctgctgccgaacccgcagcag
atcctgctgccgggtgccttcgtcagcttccaggccaacctgggcgagcgcaacaacgcc
tacctggtgccgcagcaggcactgctgcgtgacaccaccggcggctacgtgatggtggtc
ggtgccgacggcaaggtcatccgcaagaacgtgaagaccgacggtgcgcagaacggcaac
tggctggtcagcgacggcctggccgccggtgacaaggtgatcgtggccggcgtgcagaag
gtcaaggaaggcgcaccggcagtcgccaagccgtggaccccggggcaggacgccaacggc
aagcctgccgcaggcggcgccgctccggcgggcgcggcaccggccgcaggcaaggcaccg
gccgacgcggccaagcccgagcaggccgatgcggccaagccggcagccaccgattcgaac
aagcagtaa

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