Stenotrophomonas geniculata: RKE57_13765
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Entry
RKE57_13765 CDS
T09411
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sgen
Stenotrophomonas geniculata
Pathway
sgen00020
Citrate cycle (TCA cycle)
sgen00785
Lipoic acid metabolism
sgen01100
Metabolic pathways
sgen01110
Biosynthesis of secondary metabolites
sgen01120
Microbial metabolism in diverse environments
sgen01200
Carbon metabolism
sgen01210
2-Oxocarboxylic acid metabolism
Module
sgen_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sgen_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sgen00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RKE57_13765
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RKE57_13765
Enzymes [BR:
sgen01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
RKE57_13765
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Paralog
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
WNF09136
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All DBs
Position
2972780..2975611
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AA seq
943 aa
AA seq
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MDNQLKQFAQSSQLAGGNASYVEDLYEQYLVSPDSVDPKWKTYFDGFKGREAGDIPHSAV
ISHIADAAKDALKAGTGSGAGDERERNVGRLITAYRSRGHLDARLDPLGLAAPVNTPDLG
LPFHSLSDADLNSEFSTGGVGGQPRMKLGDLLARLKATYTGSIGAEFMHISEVEQRQWIY
KKLEAAGGNYQLDADTQRRTLERLTAAEGLERYLHTKYVGQKRFSLEGGDSLIPMMDTII
RSAGKDGVKDVVIGMAHRGRLNVLVNTLGKNPRKLFDEFEGKFEHDEHASAGDVKYHMGF
SADVATEGGPVHLALAFNPSHLEIADPVVAGSVRSRQERRKDTARKQVMPILIHGDAAFS
GQGVVMELFQMSQARGFAVGGTVHIVVNNQVGFTTSNPLDTRSTRYATDVAKMIAAPVLH
VNGDDPEAVVFAAQLAFEFRQKFAKDVVIDLMCYRRWGHNEADEPAITQPLMYQVIRKHA
TTREMYAEQLEKAGVIAAGAGKAMVDAYREKLDAGEVTTELAKVEKTPPTSPLFVDWPKL
LEGKLSDPISTKVEKNKLVELAKLINTIPEDVQLHSRVAKVYDDRRKMAAGEIPGDWGFA
ENLAYATLLDEGHALRLVGQDVGRGTFTHRHAILHDQKTDNYYMPLRQLVDSPEKATVID
SLLSEEAVMAYEYGFSTTDPNTLCIWEGQFGDFANGAQVVIDQFIAAGEAKWGRISGLTL
LLPHGYEGQGPEHSSARLERFLQLCALENMLVVVPSTPAQAFHMLRRQLHMTTRKPLVVM
SPKSLLRHKLAVSTLDELANGEFQHLIGDASADAKKVKRVVLCSGKVYYDLLEDQTKRGQ
DDVAIIRVEQLYPFPRALLAAELKKYGKATDVVWTQEEPQNQGAWYQIRHHLQFCLADGQ
NLHYAGRARSASPAAGHMADHVREQQQLVADALVNPFNDTFAE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
gtggacaatcaactgaagcagtttgcgcaatcttcgcaactcgccggcggcaacgcctcc
tatgtcgaggacctgtacgagcagtacctggtctccccggatagtgtcgatcccaaatgg
aaaacctacttcgacggcttcaagggccgcgaagcaggtgacatcccgcactcggctgtc
atctcccacatcgcggacgcggccaaggatgcgctgaaagccggcaccggcagcggtgcg
ggcgacgagcgtgagcgcaatgtcggtcgcctgatcaccgcctaccgctcgcgtggtcac
ctggacgcgcgccttgatccgctggggctggccgcaccggtcaacaccccggacctgggg
ctgccgttccacagcctgtccgatgccgacctcaacagcgagttcagcaccggcggcgtc
ggcggccagccacgcatgaagctgggcgacctgcttgcacgcctgaaggcgacctacacc
ggctcgatcggtgcggagttcatgcacatctccgaggtcgagcagcgccagtggatctac
aagaagctggaagcggccggtggcaactaccagctggacgctgacacccagcgccgcacc
ctggagcgcctgaccgcggctgaaggcctggagcgctacctgcacaccaagtacgtcggc
cagaagcgcttctcgctggaaggcggcgactcgctgatcccgatgatggacaccatcatc
cgcagcgccggcaaggatggcgtcaaggacgtggtgatcggcatggcccaccgcggccgc
ctgaacgtgctggtcaacaccctgggcaagaacccgcgcaagctgttcgacgagttcgaa
ggcaagttcgagcacgacgagcacgcctcggccggtgacgtgaagtaccacatgggcttc
tcggccgacgtcgccaccgaaggcggcccggtgcacctggcgctggcgttcaacccgtcg
cacctggaaatcgccgacccggtcgtggccggttccgtgcgttcgcgccaggagcgccgc
aaggacaccgcccgcaagcaggtcatgccgatcctgatccacggcgacgcggccttctcc
ggccagggcgtggtcatggagctgttccagatgtcgcaggcccgcggcttcgccgtcggc
ggcaccgtgcacatcgtggtcaacaaccaggtcggcttcaccacctccaacccgctggat
acgcgttccacgcgctacgccaccgacgtggcgaagatgatcgccgccccggtgctgcac
gtgaacggcgatgatccggaagcggtggtgttcgccgcgcagctggccttcgagttccgc
cagaagtttgccaaggacgtggtcatcgacctgatgtgctaccgccgttggggtcacaac
gaggccgacgaaccggcgatcacccagccgctgatgtaccaggtgatccgcaagcacgcc
accacccgcgagatgtacgccgagcagctggaaaaggcgggcgtgatcgccgccggcgcc
ggcaaggcgatggtcgatgcctaccgcgagaaactggatgccggtgaagtgaccaccgaa
ctggccaaggtcgagaagactccgccgaccagcccgctgttcgtcgattggccgaagctg
ctggaaggcaagctgtccgatccgatctcgaccaaggtcgagaagaacaagctggtcgag
ctggccaagctgatcaacaccattcccgaagacgtgcagctgcactcgcgcgtggccaag
gtctacgacgaccgccgcaagatggccgccggcgagatcccgggcgactggggctttgcc
gagaacctggcctacgccaccctgctcgatgaaggccatgcactgcgcctggtcggccag
gacgtgggccgcggtacgttcacgcaccgccacgcgatcctgcacgaccagaagaccgac
aactactacatgccgctgcggcagctggtggattcgccggagaaggccaccgtcatcgat
tcgctgctgagcgaagaagcggtgatggcctacgagtatggcttctccaccaccgatccg
aacacgctgtgcatctgggaaggccagttcggcgacttcgccaacggcgcccaggtggtg
atcgaccagttcatcgccgccggtgaagccaagtggggccgtatttccggcctgaccctg
ctgctgccgcatggctatgaagggcagggaccggaacacagctcggcgcgcctggagcgc
ttcctgcagctgtgcgcgctggagaacatgctggttgtcgtgccgtcgaccccggcgcag
gccttccacatgctgcgtcgccagctgcacatgaccacccgcaagccgctggtggtgatg
tcgccgaagtcactgctgcgccacaagctggccgtgtcgaccctggacgagctggccaat
ggcgagttccagcacctgatcggcgacgccagcgcggacgccaagaaagtcaagcgcgtg
gtgctgtgctcgggcaaggtctactacgacctgctggaagaccagaccaagcgtggccag
gacgacgtggcgatcatccgcgtggagcagctgtatccgttcccacgtgcactgctggct
gccgaactgaagaagtacggcaaggccaccgacgtggtgtggacgcaggaagaaccgcag
aaccagggtgcgtggtaccagatccgccaccacctgcagttctgcctggccgatggccag
aacctgcactacgccggtcgcgcacgttcggcttcgccggctgccggtcacatggctgac
cacgtccgcgaacagcagcagctggtcgccgacgcactggtcaacccgttcaacgacacg
ttcgctgaataa
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